Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63970 | Canola | plastid | 90.79 | 90.79 |
| Bra003587.1-P | Field mustard | cytosol, plastid, vacuole | 89.66 | 90.51 |
| CDX79348 | Canola | cytosol, plasma membrane, vacuole | 89.47 | 90.49 |
| Bra008437.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 90.41 | 90.41 |
| CDX67970 | Canola | plasma membrane | 81.77 | 89.88 |
| CDX87346 | Canola | cytosol, peroxisome, plasma membrane | 86.09 | 88.25 |
| Bra035149.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 86.09 | 88.25 |
| CDY39940 | Canola | cytosol, peroxisome, plasma membrane | 85.71 | 87.86 |
| AT1G15960.1 | Thale cress | plasma membrane | 86.65 | 87.48 |
| VIT_09s0070g00210.t01 | Wine grape | plastid | 79.14 | 77.82 |
| KRH23641 | Soybean | plastid | 79.51 | 77.76 |
| KRH09654 | Soybean | plastid | 79.32 | 77.29 |
| KRH47347 | Soybean | plasma membrane | 77.44 | 75.6 |
| Solyc03g116900.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 72.37 | 73.75 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 75.0 | 73.48 |
| CDY64859 | Canola | cytosol, peroxisome, plasma membrane, plastid | 90.41 | 72.33 |
| TraesCS7D01G451900.1 | Wheat | plasma membrane | 74.25 | 72.08 |
| TraesCS7A01G464300.2 | Wheat | plasma membrane | 74.06 | 71.9 |
| TraesCS7B01G364800.1 | Wheat | plasma membrane | 74.06 | 71.9 |
| HORVU7Hr1G106570.1 | Barley | plasma membrane | 73.5 | 71.35 |
| Zm00001d014391_P008 | Maize | plasma membrane | 73.31 | 70.91 |
| EER90213 | Sorghum | plastid | 72.93 | 70.55 |
| Os06t0676000-01 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 72.74 | 70.36 |
| KRH44555 | Soybean | mitochondrion | 77.63 | 70.24 |
| AT5G67330.1 | Thale cress | plasma membrane | 35.53 | 36.91 |
| AT2G23150.1 | Thale cress | plasma membrane | 35.15 | 36.74 |
| AT1G47240.1 | Thale cress | plasma membrane | 34.77 | 34.91 |
| AT4G18790.1 | Thale cress | plasma membrane | 34.21 | 34.34 |
| AT5G03280.1 | Thale cress | plasma membrane | 21.62 | 8.89 |
Protein Annotations
| MapMan:24.2.3.10 | EntrezGene:844422 | ProteinID:AAF14670.1 | ProteinID:AEE36455.1 | EMBL:AF165125 | EMBL:AF181687 |
| ProteinID:ANM59231.1 | ArrayExpress:AT1G80830 | EnsemblPlantsGene:AT1G80830 | RefSeq:AT1G80830 | TAIR:AT1G80830 | RefSeq:AT1G80830-TAIR-G |
| EnsemblPlants:AT1G80830.1 | TAIR:AT1G80830.1 | EMBL:AY086428 | EMBL:AY128347 | EMBL:BT029300 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 | GO:GO:0015086 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0030001 | GO:GO:0034755 | GO:GO:0046873 | GO:GO:0055071 | GO:GO:0055072 | GO:GO:0070574 |
| GO:GO:0071421 | HAMAP:MF_00221 | RefSeq:NP_001321606.1 | RefSeq:NP_178198.1 | Symbol:NRAMP1 | InterPro:NRAMP_fam |
| PFAM:PF01566 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025257 | PO:PO:0025281 | PRINTS:PR00447 | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF38 |
| UniProt:Q9SAH8 | TIGRFAMs:TIGR01197 | TMHMM:TMhelix | UniParc:UPI00000AB9C9 | SEG:seg | : |
Description
NRAMP1Metal transporter Nramp1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH8]
Coordinates
chr1:-:30372668..30376065
Molecular Weight (calculated)
57565.5 Da
IEP (calculated)
8.705
GRAVY (calculated)
0.663
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.