Factsheet for Bra003587.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67970	Canola	plasma membrane	91.27	99.38
Bra008437.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	93.17	92.29
AT1G80830.1	Thale cress	plastid	90.51	89.66
Bra035149.1-P	Field mustard	cytosol, peroxisome, plasma membrane	87.86	89.21
Bra026089.1-P	Field mustard	plasma membrane	76.85	86.54
VIT_09s0070g00210.t01	Wine grape	plastid	78.75	76.71
KRH23641	Soybean	plastid	78.56	76.1
KRH09654	Soybean	plastid	77.99	75.27
KRH47347	Soybean	plasma membrane	77.04	74.5
Solyc03g116900.2.1	Tomato	cytosol, peroxisome, plasma membrane	72.87	73.56
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	74.0	71.82
TraesCS7D01G451900.1	Wheat	plasma membrane	72.87	70.07
TraesCS7B01G364800.1	Wheat	plasma membrane	72.87	70.07
TraesCS7A01G464300.2	Wheat	plasma membrane	72.87	70.07
Zm00001d014391_P008	Maize	plasma membrane	73.06	70.0
EER90213	Sorghum	plastid	72.87	69.82
HORVU7Hr1G106570.1	Barley	plasma membrane	72.11	69.34
Os06t0676000-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	72.11	69.09
KRH44555	Soybean	mitochondrion	77.04	69.05
Bra033988.1-P	Field mustard	plasma membrane	69.64	67.59
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	34.72	35.81
Bra012154.1-P	Field mustard	peroxisome	34.54	35.55
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	34.35	34.35
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	34.35	34.02
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.16	33.83
Bra039185.1-P	Field mustard	cytosol	34.16	13.85
Bra009539.1-P	Field mustard	plasma membrane	20.87	8.39

Protein Annotations

MapMan:24.2.3.10	EnsemblPlantsGene:Bra003587	EnsemblPlants:Bra003587.1	EnsemblPlants:Bra003587.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	UniProt:M4CHA4	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF38	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0002541363	SEG:seg

Description

AT1G80830 (E=3e-247) NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrA07:-:13939007..13942016

Molecular Weight (calculated)

57198.9 Da

IEP (calculated)

8.731

GRAVY (calculated)

0.628

Length

527 amino acids

Sequence
(BLAST)

001: MAASASERPQ FISNNGGNSS FSDAPLIDNS DPNQIIVPEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QSGAQYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EHCRAEYSKV PNFLLWVVAE IAVVALIGTA FALNMLFHIP VWIGVLLTGL STLMLLALQQ YGVRKLEFLI AFLVFTIAIC FFVELHYSKP
201: DPREVLHGLF VPQLKGNGAT GLAISLLGAM VMPHNLFLHS ALVLSRKIPR SATGIKEACR FYLIESGLAL TVAFLINVSV ISVSGAVCNA PDLSPEDRAK
301: CEDLDLNKAS FLLRNVVGKW SSKLFAIALL ASGQSSTITG TYAGQYVMQG FLDLRLEPWL RNFLTRCLAI IPSLIVAIIG GSAGAGKLII IASMILSFEL
401: PFALVPLLKF TSCKMKMGSY VNPIAVSALT WVIGGLIMGI NIYYLVSSFI KLLVHSHMKL GLVVFCGILG FSGIAIYLAS IAYLVFRRNR KAIPLLASTN
501: SQTVETLPRQ DIVDMQLHGK LSTSDVD

Best Arabidopsis Sequence Match ( AT1G80830.2 )
(BLAST)

001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD

Arabidopsis Description

NRAMP1Metal transporter Nramp1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.