Factsheet for Bra008437.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 3
nucleus 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63970	Canola	plastid	99.06	99.06
Bra003587.1-P	Field mustard	cytosol, plastid, vacuole	92.29	93.17
Bra035149.1-P	Field mustard	cytosol, peroxisome, plasma membrane	89.66	91.91
AT1G80830.1	Thale cress	plastid	90.41	90.41
Bra026089.1-P	Field mustard	plasma membrane	75.19	85.47
CDY64859	Canola	cytosol, peroxisome, plasma membrane, plastid	99.25	79.4
KRH23641	Soybean	plastid	78.95	77.21
VIT_09s0070g00210.t01	Wine grape	plastid	78.2	76.89
KRH09654	Soybean	plastid	78.2	76.19
KRH47347	Soybean	plasma membrane	76.69	74.86
Solyc03g116900.2.1	Tomato	cytosol, peroxisome, plasma membrane	72.18	73.56
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	74.25	72.74
TraesCS7D01G451900.1	Wheat	plasma membrane	74.44	72.26
TraesCS7A01G464300.2	Wheat	plasma membrane	74.06	71.9
TraesCS7B01G364800.1	Wheat	plasma membrane	74.06	71.9
HORVU7Hr1G106570.1	Barley	plasma membrane	73.68	71.53
Os06t0676000-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	73.12	70.73
EER90213	Sorghum	plastid	72.93	70.55
Zm00001d014391_P008	Maize	plasma membrane	72.74	70.36
KRH44555	Soybean	mitochondrion	76.69	69.39
Bra033988.1-P	Field mustard	plasma membrane	68.8	67.4
Bra012154.1-P	Field mustard	peroxisome	35.15	36.52
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	34.77	36.2
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	34.77	35.1
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	34.96	34.96
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.4	34.4
Bra039185.1-P	Field mustard	cytosol	34.4	14.08
Bra009539.1-P	Field mustard	plasma membrane	21.05	8.54

Protein Annotations

MapMan:24.2.3.10	EnsemblPlantsGene:Bra008437	EnsemblPlants:Bra008437.1	EnsemblPlants:Bra008437.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	UniProt:M4CW40	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF38	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0002546A67	SEG:seg

Description

AT1G80830 (E=2e-269) NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrA02:+:15638179..15641038

Molecular Weight (calculated)

57674.6 Da

IEP (calculated)

8.527

GRAVY (calculated)

0.623

Length

532 amino acids

Sequence
(BLAST)

001: MAASASERPQ FISSNGGNRS FSNAPLIDNS DPNQIIVPEK KSWKNFFAYL GPGFLVLIAY IDPGNFETDL QAGAQYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EHCRAEYSKV PNFLLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLML LALQQYGVRK LEFLIAFLVF TIALCFVIEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSSTGI KEACRFYLIE SGLALMIAFL INVSVISVSG AVCNAPDLTP
301: EDRAKCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNFLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNHMA ITTLTWVIGA LIMGINIYYI ISSFTKLLIH SHMKLALVIF CGILGFSGIA IYLASIAYLV FRKNRKASPL
501: LASTNSQTVE TLPRQDIVDM QLHGKAAASD LD

Best Arabidopsis Sequence Match ( AT1G80830.2 )
(BLAST)

001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD

Arabidopsis Description

NRAMP1Metal transporter Nramp1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.