Factsheet for Bra012577.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62556	Canola	plasma membrane	99.81	99.81
AT4G18790.1	Thale cress	plasma membrane	90.79	91.13
VIT_18s0001g09490.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.36	68.84
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	66.54	67.17
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.73	66.73
GSMUA_Achr9P26850_001	Banana	plasma membrane	53.01	66.51
PGSC0003DMT400059923	Potato	cytosol, peroxisome, plasma membrane	63.72	65.44
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	62.59	65.17
PGSC0003DMT400055473	Potato	cytosol, peroxisome, plasma membrane	65.98	65.0
Bra012154.1-P	Field mustard	peroxisome	60.9	63.28
Solyc04g078250.2.1	Tomato	cytosol, nucleus, plasma membrane	60.9	62.43
Os12t0581600-01	Rice	cytosol, nucleus, plasma membrane	63.35	62.29
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	54.14	61.8
Zm00001d048129_P004	Maize	cytosol, peroxisome, plasma membrane	59.77	61.63
EER92665	Sorghum	cytosol, peroxisome, plasma membrane	59.77	61.63
TraesCS5D01G084900.1	Wheat	plasma membrane	63.35	61.61
TraesCS5B01G078700.1	Wheat	cytosol, plasma membrane, vacuole	63.16	61.43
EES17269	Sorghum	cytosol, peroxisome, plasma membrane	62.78	61.4
TraesCS5A01G072200.1	Wheat	cytosol, plasma membrane, vacuole	62.97	61.24
TraesCS4D01G076500.1	Wheat	cytosol, peroxisome, plasma membrane	60.53	60.75
HORVU5Hr1G018850.2	Barley	cytosol, nucleus, plasma membrane	62.41	60.69
TraesCS4A01G237200.1	Wheat	cytosol, peroxisome, plasma membrane	60.53	60.64
TraesCS4B01G078000.1	Wheat	cytosol, peroxisome, plasma membrane	60.34	60.45
GSMUA_Achr6P07820_001	Banana	cytosol, plasma membrane, vacuole	50.0	60.05
Zm00001d033367_P001	Maize	cytosol, nucleus, plasma membrane	60.71	59.81
TraesCS4D01G254100.1	Wheat	cytosol, plasma membrane, vacuole	57.89	59.34
HORVU4Hr1G013220.1	Barley	mitochondrion, peroxisome, plasma membrane	61.09	59.2
TraesCS4A01G050500.1	Wheat	cytosol, peroxisome, plasma membrane	57.89	59.12
HORVU4Hr1G069320.1	Barley	vacuole	57.89	59.0
Os03t0208500-01	Rice	plasma membrane	58.08	58.97
TraesCS4B01G254300.1	Wheat	cytosol, plasma membrane, vacuole	57.71	58.93
KXG38042	Sorghum	cytosol, nucleus, plasma membrane	60.34	58.79
Zm00001d030846_P001	Maize	plasma membrane	62.41	58.66
KRH47958	Soybean	cytosol, nucleus, plasma membrane	60.9	58.17
KRH06520	Soybean	cytosol, nucleus, plasma membrane	61.09	58.14
GSMUA_Achr3P18820_001	Banana	cytosol, peroxisome, plasma membrane	50.94	56.93
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	21.99	53.67
Os03t0607400-01	Rice	cytosol, peroxisome, plasma membrane, plastid	21.05	51.85
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	10.71	46.34
Bra026089.1-P	Field mustard	plasma membrane	32.52	36.97
Bra035149.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.15	36.03
Bra008437.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	34.96	34.96
Bra003587.1-P	Field mustard	cytosol, plastid, vacuole	34.02	34.35
Bra033988.1-P	Field mustard	plasma membrane	31.2	30.57
Bra039185.1-P	Field mustard	cytosol	63.16	25.85
Bra009539.1-P	Field mustard	plasma membrane	19.17	7.78

Protein Annotations

MapMan:24.2.3.10	EnsemblPlantsGene:Bra012577	EnsemblPlants:Bra012577.1	EnsemblPlants:Bra012577.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	UniProt:M4D7W7	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0002540A99	SEG:seg

Description

AT4G18790 (E=4e-244) NRAMP5, ATNRAMP5 | NRAMP5; inorganic anion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrA03:-:23443959..23446272

Molecular Weight (calculated)

58583.7 Da

IEP (calculated)

4.716

GRAVY (calculated)

0.445

Length

532 amino acids

Sequence
(BLAST)

001: MTDPTVSRQV NSPLKRNESN GEFKRLLLPE TSQSDDPNES PAEPPENQVL TVEEEEGETT LESVPPFSWA KLWKFTGPGF LMSIAFLDPG NIEGDLQAGA
101: VAGYSLLWLL LWATLMGLLI QLLSARIGVA TGRHLAEICR NEYPSWARIL LWFMAEVALI GADIQEVIGS AIALQILTRG FLPIWAGVII TSLDCFLISY
201: LEKCGMRKLE GLFAVLIATM ALSFAWMFNE TKPSGEELII GILIPKLGSK TIRQAVGVVG CVITPHNVFL HSALVQSRKT NPKDIHRVQE ALNYYNIEST
301: AALFVSFMIN LFVTAVFAKG FYGTKQADSI GLVNAGHYLQ EKYGGGVFPI LYIWGIGLLA AGQSSTITGT YAGQFIMEGF LDLQMEQWLS AFITRSFAIV
401: PTMVVALMFN TSEGSLDVLN EWLNILQSMQ IPFAVIPLLT MVSNEHIMGV FKIGPSLEKL AWTVAVFVMM INGYLLLDFF MAAANGFFVG LLVFAGVVTY
501: VSFIIYLVSY RSSQSSSWSS LEMSQRVVST ET

Best Arabidopsis Sequence Match ( AT4G18790.1 )
(BLAST)

001: MTGSTVSRQE NSPKRPNDSN GEFKRLLVPE TSQPEEDELH ESPPENQILN VEEDRDKTYD SVPPFSWAKL WKFTGPGFLM SIAFLDPGNI EGDLQAGAVA
101: GYSLLWLLLW ATLMGLLMQL LSARIGVATG RHLAEICRSE YPSWARILLW FMAEVALIGA DIQEVIGSAI ALQILTRGFL PIWVGVIITS FDCFLISYLE
201: KCGMRKLEGL FAVLIATMAL SFAWMFNETK PSVEELFIGI IIPKLGSKTI REAVGVVGCV ITPHNVFLHS ALVQSRKTDP KEINRVQEAL NYYTIESSAA
301: LFVSFMINLF VTAVFAKGFY GTKQADSIGL VNAGYYLQEK YGGGVFPILY IWGIGLLAAG QSSTITGTYA GQFIMEGFLD LQMEQWLSAF ITRSFAIVPT
401: MFVAIMFNTS EGSLDVLNEW LNILQSMQIP FAVIPLLTMV SNEHIMGVFK IGPSLEKLAW TVAVFVMMIN GYLLLDFFMA EVEGFLVGFL VFGGVVGYIS
501: FIIYLVSYRS SQSSSWSSLE MSERVVSTET

Arabidopsis Description

NRAMP5Metal transporter Nramp5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN36]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.