CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plasma membrane

Predictor Summary:

nucleus 2
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06520	Soybean	cytosol, nucleus, plasma membrane	96.77	96.42
KRH61379	Soybean	cytosol, peroxisome, plasma membrane	65.35	70.27
VIT_18s0001g09490.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.43	69.03
KRH52059	Soybean	cytosol, nucleus, plasma membrane	64.63	68.97
PGSC0003DMT400055473	Potato	cytosol, peroxisome, plasma membrane	64.45	66.48
KRH28413	Soybean	plasma membrane	59.6	65.61
KRH77065	Soybean	plasma membrane	59.6	65.48
KRH58028	Soybean	plasma membrane	60.5	65.31
KRH04493	Soybean	peroxisome	60.14	64.92
PGSC0003DMT400059923	Potato	cytosol, peroxisome, plasma membrane	59.78	64.29
GSMUA_Achr9P26850_001	Banana	plasma membrane	48.11	63.21
Solyc04g078250.2.1	Tomato	cytosol, nucleus, plasma membrane	58.35	62.62
AT4G18790.1	Thale cress	plasma membrane	58.71	61.7
GSMUA_Achr6P07820_001	Banana	cytosol, plasma membrane, vacuole	48.83	61.4
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	58.17	60.9
CDY62556	Canola	plasma membrane	58.17	60.9
CDY64917	Canola	cytosol, plasma membrane, plastid	57.99	60.83
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	50.63	60.52
TraesCS5D01G084900.1	Wheat	plasma membrane	59.43	60.51
TraesCS5B01G078700.1	Wheat	cytosol, plasma membrane, vacuole	59.25	60.33
EES17269	Sorghum	cytosol, peroxisome, plasma membrane	58.89	60.29
TraesCS5A01G072200.1	Wheat	cytosol, plasma membrane, vacuole	59.07	60.15
EER92665	Sorghum	cytosol, peroxisome, plasma membrane	55.66	60.08
HORVU5Hr1G018850.2	Barley	cytosol, nucleus, plasma membrane	58.89	59.96
Os12t0581600-01	Rice	cytosol, nucleus, plasma membrane	57.81	59.52
Zm00001d048129_P004	Maize	cytosol, peroxisome, plasma membrane	54.76	59.11
Os03t0208500-01	Rice	plasma membrane	54.94	58.4
TraesCS4D01G076500.1	Wheat	cytosol, peroxisome, plasma membrane	55.48	58.3
TraesCS4D01G254100.1	Wheat	cytosol, plasma membrane, vacuole	54.22	58.19
TraesCS4A01G237200.1	Wheat	cytosol, peroxisome, plasma membrane	55.3	58.0
GSMUA_Achr3P18820_001	Banana	cytosol, peroxisome, plasma membrane	49.55	57.98
Zm00001d030846_P001	Maize	plasma membrane	58.89	57.95
HORVU4Hr1G069320.1	Barley	vacuole	54.22	57.85
TraesCS4B01G078000.1	Wheat	cytosol, peroxisome, plasma membrane	55.12	57.82
TraesCS4B01G254300.1	Wheat	cytosol, plasma membrane, vacuole	54.04	57.77
TraesCS4A01G050500.1	Wheat	cytosol, peroxisome, plasma membrane	54.04	57.77
Zm00001d033367_P001	Maize	cytosol, nucleus, plasma membrane	55.48	57.22
KXG38042	Sorghum	cytosol, nucleus, plasma membrane	56.01	57.14
HORVU4Hr1G013220.1	Barley	mitochondrion, peroxisome, plasma membrane	54.76	55.56
Os03t0607400-01	Rice	cytosol, peroxisome, plasma membrane, plastid	19.93	51.39
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	19.03	48.62
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	10.59	47.97
KRH09654	Soybean	plastid	32.32	32.97
KRH53274	Soybean	plastid	31.96	32.72
KRH23641	Soybean	plastid	31.96	32.72
KRH47347	Soybean	plasma membrane	31.6	32.29
KRH44555	Soybean	mitochondrion	31.24	29.59
KRH67695	Soybean	endoplasmic reticulum, plasma membrane, plastid	18.31	7.93
KRH32544	Soybean	plasma membrane	18.31	7.86
KRH19943	Soybean	plasma membrane	17.95	7.62

Protein Annotations

EntrezGene:100801411	MapMan:24.2.3.10	EMBL:ACUP02004185	EnsemblPlantsGene:GLYMA_07G058900	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	UniProt:K7KZX0	EnsemblPlants:KRH47958	ProteinID:KRH47958	ProteinID:KRH47958.1	HAMAP:MF_00221
InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447	PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	TIGRFAMs:TIGR01197
TMHMM:TMhelix	UniParc:UPI0002338805	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:5268461..5272348

Molecular Weight (calculated)

61770.1 Da

IEP (calculated)

4.567

GRAVY (calculated)

0.391

Length

557 amino acids

Sequence
(BLAST)

001: MSTQSQQHNK REFKGEEEEE EEEENHLLHS ECETIPFSSP NTSPSEWEHG NKEEEEEEEK DTVYAAKDKV QIFDLESAGG VREGSTAVPP FSWRKLWLFT
101: GPGLLMSVAF LDPGNLEGDL QAGAIAGYTL LWLLMWSTIM GLVIQLLSAR LGVATGRHLA ELCREEYSNW ARLVLWILAE LALIAADIQE VIGSAIALKI
201: LSHGLLPIWA GVIITAMDCF FFLFLENYGV RKLEGVFAVF IGTMGFSFAW MFFNTNPSEE ELLMGLLIPR VNSKTLRQAV EIVGCVITPH NVFLHSALVQ
301: SRDIDIRNKG QVQEAINYYS IESSVALLVT LVINLFVITV FARVFYGTEQ AKGIGLVNAG QYLQERYGGG LFPILYIWGI GLLAAGQSST ITGTYAGQFI
401: TEGFLKLNIK KWLRALITRS CAIVPTMICA IVFNTSEGSL DTLNEWLNVV QAIQIPFALI PLLTLVSKEE VMGTFRIGPI VERVAWSVAV LVILVYGYML
501: LDFFLDEVDG LLFGFLVFLS AAAWISFIIY LVQHSGAISS ILVRSPNSKG FFSLAGN

Best Arabidopsis Sequence Match ( AT1G15960.1 )
(BLAST)

001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN

Arabidopsis Description

NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.