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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012577.1-P Field mustard cytosol, plasma membrane, plastid 99.81 99.81
CDY64917 Canola cytosol, plasma membrane, plastid 98.12 98.31
AT4G18790.1 Thale cress plasma membrane 90.6 90.94
VIT_18s0001g09490.t01 Wine grape cytosol, peroxisome, plasma membrane 69.17 68.66
CDY17090 Canola cytosol, peroxisome, plasma membrane 67.67 67.54
CDY47594 Canola cytosol, nucleus, plasma membrane 66.73 67.36
CDY17036 Canola cytosol, nucleus, plasma membrane 66.73 67.36
GSMUA_Achr9P26850_001 Banana plasma membrane 53.01 66.51
PGSC0003DMT400059923 Potato cytosol, peroxisome, plasma membrane 63.72 65.44
PGSC0003DMT400055473 Potato cytosol, peroxisome, plasma membrane 65.98 65.0
CDY21478 Canola plasma membrane 61.28 64.81
CDX76871 Canola cytosol, peroxisome, plasma membrane 62.59 64.66
CDY06751 Canola plasma membrane 50.56 64.2
CDY57441 Canola peroxisome 60.9 63.28
Solyc04g078250.2.1 Tomato cytosol, nucleus, plasma membrane 60.9 62.43
Os12t0581600-01 Rice cytosol, nucleus, plasma membrane 63.16 62.11
GSMUA_Achr4P32750_001 Banana peroxisome, plasma membrane, vacuole 54.14 61.8
TraesCS5D01G084900.1 Wheat plasma membrane 63.53 61.79
EER92665 Sorghum cytosol, peroxisome, plasma membrane 59.77 61.63
Zm00001d048129_P004 Maize cytosol, peroxisome, plasma membrane 59.77 61.63
TraesCS5B01G078700.1 Wheat cytosol, plasma membrane, vacuole 63.35 61.61
EES17269 Sorghum cytosol, peroxisome, plasma membrane 62.97 61.58
TraesCS5A01G072200.1 Wheat cytosol, plasma membrane, vacuole 63.16 61.43
CDX83202 Canola plasma membrane 62.03 61.34
HORVU5Hr1G018850.2 Barley cytosol, nucleus, plasma membrane 62.59 60.88
TraesCS4D01G076500.1 Wheat cytosol, peroxisome, plasma membrane 60.34 60.57
TraesCS4A01G237200.1 Wheat cytosol, peroxisome, plasma membrane 60.34 60.45
TraesCS4B01G078000.1 Wheat cytosol, peroxisome, plasma membrane 60.15 60.26
GSMUA_Achr6P07820_001 Banana cytosol, plasma membrane, vacuole 50.0 60.05
Zm00001d033367_P001 Maize cytosol, nucleus, plasma membrane 60.71 59.81
TraesCS4D01G254100.1 Wheat cytosol, plasma membrane, vacuole 57.89 59.34
TraesCS4A01G050500.1 Wheat cytosol, peroxisome, plasma membrane 57.89 59.12
HORVU4Hr1G013220.1 Barley mitochondrion, peroxisome, plasma membrane 60.9 59.02
HORVU4Hr1G069320.1 Barley vacuole 57.89 59.0
Os03t0208500-01 Rice plasma membrane 58.08 58.97
TraesCS4B01G254300.1 Wheat cytosol, plasma membrane, vacuole 57.71 58.93
Zm00001d030846_P001 Maize plasma membrane 62.59 58.83
KXG38042 Sorghum cytosol, nucleus, plasma membrane 60.34 58.79
KRH47958 Soybean cytosol, nucleus, plasma membrane 60.9 58.17
KRH06520 Soybean cytosol, nucleus, plasma membrane 61.09 58.14
GSMUA_Achr3P18820_001 Banana cytosol, peroxisome, plasma membrane 50.94 56.93
CDY46091 Canola cytosol, nucleus, plastid 19.36 53.65
Os03t0606600-00 Rice extracellular, mitochondrion, peroxisome 21.8 53.21
Os03t0607400-01 Rice cytosol, peroxisome, plasma membrane, plastid 20.86 51.39
CDY12837 Canola nucleus 61.28 48.95
Os01t0733001-00 Rice endoplasmic reticulum, nucleus 10.71 46.34
CDY35055 Canola endoplasmic reticulum, extracellular, vacuole 9.59 43.97
CDY33364 Canola cytosol, peroxisome, plasma membrane 33.83 36.59
CDX87346 Canola cytosol, peroxisome, plasma membrane 35.15 36.03
CDY39940 Canola cytosol, peroxisome, plasma membrane 34.96 35.84
CDY63970 Canola plastid 34.96 34.96
CDX79348 Canola cytosol, plasma membrane, vacuole 34.21 34.6
CDY35053 Canola mitochondrion, plasma membrane 18.05 33.33
CDX67970 Canola plasma membrane 30.26 33.26
CDY35054 Canola extracellular 6.58 32.41
CDY64859 Canola cytosol, peroxisome, plasma membrane, plastid 35.34 28.27
CDX70318 Canola plasma membrane 18.61 8.26
CDY10393 Canola plasma membrane 18.42 8.19
Protein Annotations
MapMan:24.2.3.10GO:A0A078JA25UniProt:A0A078JA25EnsemblPlants:CDY62556ProteinID:CDY62556ProteinID:CDY62556.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0030001GO:GO:0046873EnsemblPlantsGene:GSBRNA2T00036385001HAMAP:MF_00221InterPro:NRAMP_fam
PFAM:PF01566PRINTS:PR00447PANTHER:PTHR11706PANTHER:PTHR11706:SF46TIGRFAMs:TIGR01197TMHMM:TMhelix
UniParc:UPI0004EE3197SEG:seg::::
Description
BnaA03g58400DBnaA03g58400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA25]
Coordinates
chrLK034159:-:17230..19549
Molecular Weight (calculated)
58599.7 Da
IEP (calculated)
4.716
GRAVY (calculated)
0.437
Length
532 amino acids
Sequence
(BLAST)
001: MTDPTVSRQV NSPLKRNESN GEFKRLLLPE TSQSDDPNES PAEPPENQVL TVEEEEGETT LESVPPFSWA KLWKFTGPGF LMSIAFLDPG NIEGDLQAGA
101: VAGYSLLWLL LWATLMGLLI QLLSARIGVA TGRHLAEICR NEYPSWARIL LWFMAEVALI GADIQEVIGS AIALQILTRG YLPIWAGVII TSLDCFLISY
201: LEKCGMRKLE GLFAVLIATM ALSFAWMFNE TKPSGEELII GILIPKLGSK TIRQAVGVVG CVITPHNVFL HSALVQSRKT NPKDIHRVQE ALNYYNIEST
301: AALFVSFMIN LFVTAVFAKG FYGTKQADSI GLVNAGHYLQ EKYGGGVFPI LYIWGIGLLA AGQSSTITGT YAGQFIMEGF LDLQMEQWLS AFITRSFAIV
401: PTMVVALMFN TSEGSLDVLN EWLNILQSMQ IPFAVIPLLT MVSNEHIMGV FKIGPSLEKL AWTVAVFVMM INGYLLLDFF MAAANGFFVG LLVFAGVVTY
501: VSFIIYLVSY RSSQSSSWSS LEMSQRVVST ET
Best Arabidopsis Sequence Match ( AT4G18790.1 )
(BLAST)
001: MTGSTVSRQE NSPKRPNDSN GEFKRLLVPE TSQPEEDELH ESPPENQILN VEEDRDKTYD SVPPFSWAKL WKFTGPGFLM SIAFLDPGNI EGDLQAGAVA
101: GYSLLWLLLW ATLMGLLMQL LSARIGVATG RHLAEICRSE YPSWARILLW FMAEVALIGA DIQEVIGSAI ALQILTRGFL PIWVGVIITS FDCFLISYLE
201: KCGMRKLEGL FAVLIATMAL SFAWMFNETK PSVEELFIGI IIPKLGSKTI REAVGVVGCV ITPHNVFLHS ALVQSRKTDP KEINRVQEAL NYYTIESSAA
301: LFVSFMINLF VTAVFAKGFY GTKQADSIGL VNAGYYLQEK YGGGVFPILY IWGIGLLAAG QSSTITGTYA GQFIMEGFLD LQMEQWLSAF ITRSFAIVPT
401: MFVAIMFNTS EGSLDVLNEW LNILQSMQIP FAVIPLLTMV SNEHIMGVFK IGPSLEKLAW TVAVFVMMIN GYLLLDFFMA EVEGFLVGFL VFGGVVGYIS
501: FIIYLVSYRS SQSSSWSSLE MSERVVSTET
Arabidopsis Description
NRAMP5Metal transporter Nramp5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN36]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.