Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G254100.1 Wheat cytosol, plasma membrane, vacuole 98.46 98.84
TraesCS4B01G254300.1 Wheat cytosol, plasma membrane, vacuole 97.89 97.89
HORVU4Hr1G069320.1 Barley vacuole 97.31 97.13
EER92665 Sorghum cytosol, peroxisome, plasma membrane 89.83 90.7
Zm00001d048129_P004 Maize cytosol, peroxisome, plasma membrane 88.87 89.73
Os03t0208500-01 Rice plasma membrane 89.64 89.12
GSMUA_Achr6P07820_001 Banana cytosol, plasma membrane, vacuole 60.08 70.65
GSMUA_Achr3P18820_001 Banana cytosol, peroxisome, plasma membrane 62.38 68.28
VIT_18s0001g09490.t01 Wine grape cytosol, peroxisome, plasma membrane 66.41 64.55
TraesCS5A01G072200.1 Wheat cytosol, plasma membrane, vacuole 67.37 64.17
AT1G47240.1 Thale cress plasma membrane 65.07 63.96
CDY17036 Canola cytosol, nucleus, plasma membrane 64.68 63.95
CDY47594 Canola cytosol, nucleus, plasma membrane 64.49 63.76
Bra040791.1-P Field mustard cytosol, nucleus, plasma membrane 64.49 63.76
Bra040711.1-P Field mustard cytosol, peroxisome, plasma membrane 65.07 63.72
CDY17090 Canola cytosol, peroxisome, plasma membrane 64.68 63.23
KRH61379 Soybean cytosol, peroxisome, plasma membrane 62.57 62.93
TraesCS4A01G237200.1 Wheat cytosol, peroxisome, plasma membrane 63.92 62.71
KRH52059 Soybean cytosol, nucleus, plasma membrane 62.57 62.45
CDY06751 Canola plasma membrane 49.9 62.05
PGSC0003DMT400059923 Potato cytosol, peroxisome, plasma membrane 61.04 61.39
PGSC0003DMT400055473 Potato cytosol, peroxisome, plasma membrane 63.53 61.3
Solyc04g078250.2.1 Tomato cytosol, nucleus, plasma membrane 60.65 60.89
AT4G18790.1 Thale cress plasma membrane 59.12 58.11
CDY64917 Canola cytosol, plasma membrane, plastid 59.12 58.0
Bra012577.1-P Field mustard cytosol, plasma membrane, plastid 59.12 57.89
CDY62556 Canola plasma membrane 59.12 57.89
Solyc04g078230.1.1 Tomato cytosol, extracellular, plastid 18.04 57.67
KRH06520 Soybean cytosol, nucleus, plasma membrane 58.16 54.2
KRH47958 Soybean cytosol, nucleus, plasma membrane 57.77 54.04
Solyc04g078240.1.1 Tomato cytosol 16.7 54.04
TraesCS7A01G464300.2 Wheat plasma membrane 37.24 35.4
TraesCS7A01G327300.1 Wheat plasma membrane 34.36 34.1
TraesCS4A01G004400.1 Wheat plasma membrane 35.32 34.07
TraesCS3A01G195100.1 Wheat cytosol, peroxisome, plasma membrane 28.98 27.81
TraesCS5A01G547500.1 Wheat plasma membrane 17.08 18.28
TraesCS4A01G275600.1 Wheat plasma membrane 18.43 7.99
TraesCS5A01G161200.4 Wheat plasma membrane 18.81 7.91
Protein Annotations
EnsemblPlants:TraesCS4A01G050500.1EnsemblPlantsGene:TraesCS4A01G050500GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0030001GO:GO:0046873HAMAP:MF_00221InterPro:NRAMP_fam
PANTHER:PTHR11706PANTHER:PTHR11706:SF51PFAM:PF01566PRINTS:PR00447SEG:segTIGRFAMs:TIGR01197
TMHMM:TMhelixMapMan:24.2.3.10::::
Description
No Description!
Coordinates
chr4A:+:41112135..41115809
Molecular Weight (calculated)
56826.9 Da
IEP (calculated)
6.906
GRAVY (calculated)
0.513
Length
521 amino acids
Sequence
(BLAST)
001: MASRDLAESL LPGGGGGGGA SSSHDEYEER AYDSDDKVSI SISDSEPDDV GEPGAARPRP TFSWRKLWRF TGPGFLMCIG FLDPGNLEGD LQAGAAAGYQ
101: LLWLLLWATV MGALVQLLSA RLGVVTGKHL AELCREEYPP WATRALWVMT ELALVGADIQ EVIGSAIAIK ILSGGIVPLW GGVVITAFDC FIFLFLENYG
201: VRKLEAFFGV LIATMAISFA IMFGETKPSG KELLIGLVVP KLSSKTIKQA VGIVGCIIMP HNVFLHSALV QSRKIDTKKK SRVQEAVYYY NIESILALIV
301: SFFINICVTT VFAKGFYGSD KADNIGLENA GQYLQEKYGT ALFPVLYIWA IGLLASGQSS TITGTYAGQF VMGGFLNLRL KKWLRAVITR SFAIIPTMIV
401: ALFFDTEDPT MDVLNESLNV LQSIQIPFAL IPLITLVSSE QLMGSFVVGP ITKVISWIVT IFLMLINGYL ILSFYTNEVR GAVVRSSLCV VLAVYLAFII
501: YLILRNTTLY SRLRSSVSKS S
Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.