Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G324000.1 | Wheat | plasma membrane | 97.33 | 97.33 |
| TraesCS7B01G227900.1 | Wheat | plasma membrane | 97.14 | 97.14 |
| HORVU7Hr1G078330.2 | Barley | peroxisome, plasma membrane | 92.95 | 94.76 |
| Os07t0258400-01 | Rice | plasma membrane | 81.14 | 82.24 |
| EER96161 | Sorghum | cytosol, plasma membrane, vacuole | 76.0 | 76.0 |
| TraesCS4A01G004400.1 | Wheat | plasma membrane | 75.43 | 73.33 |
| GSMUA_Achr5P25950_001 | Banana | cytosol, nucleus, plasma membrane | 57.9 | 70.21 |
| Zm00001d005479_P001 | Maize | plasma membrane | 74.67 | 66.89 |
| PGSC0003DMT400023921 | Potato | cytosol, peroxisome, plasma membrane | 67.43 | 66.79 |
| Solyc11g018530.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 67.05 | 66.42 |
| VIT_18s0001g02120.t01 | Wine grape | plasma membrane | 66.86 | 64.76 |
| KRH53274 | Soybean | plastid | 66.86 | 64.52 |
| VIT_18s0001g02140.t01 | Wine grape | plasma membrane | 58.48 | 62.15 |
| GSMUA_Achr11P... | Banana | cytosol | 61.52 | 62.12 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 65.52 | 62.09 |
| VIT_00s0218g00100.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 56.57 | 58.24 |
| TraesCS7A01G464300.2 | Wheat | plasma membrane | 56.19 | 53.83 |
| TraesCS3A01G195100.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.71 | 48.07 |
| VIT_18s0001g02130.t01 | Wine grape | plastid | 18.1 | 46.8 |
| TraesCS4A01G050500.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.1 | 34.36 |
| TraesCS5A01G072200.1 | Wheat | cytosol, plasma membrane, vacuole | 35.43 | 34.0 |
| TraesCS4A01G237200.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.29 | 33.9 |
| TraesCS5A01G547500.1 | Wheat | plasma membrane | 19.81 | 21.36 |
| TraesCS5A01G161200.4 | Wheat | plasma membrane | 21.52 | 9.12 |
| TraesCS4A01G275600.1 | Wheat | plasma membrane | 18.86 | 8.24 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G327300.1 | EnsemblPlantsGene:TraesCS7A01G327300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0034755 | GO:GO:0046873 |
| HAMAP:MF_00221 | InterPro:NRAMP_fam | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF41 | PFAM:PF01566 | PRINTS:PR00447 |
| TIGRFAMs:TIGR01197 | TMHMM:TMhelix | MapMan:24.2.3.10 | : | : | : |
Description
No Description!
Coordinates
chr7A:+:475771401..475773889
Molecular Weight (calculated)
57029.6 Da
IEP (calculated)
7.743
GRAVY (calculated)
0.612
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHNRETPAV SGKEEVDIEA VAGLRRDDCG VNSQDPAWKR FLRHIGPGFM VSLAYLDPGN LETDLQAGAN HRYELLWVIL IGLIFALIIQ SLSANLGVVT
101: GRHLAELCKS EYPVWVKICL WLLAEVAVIA ADIPEVIGTA FAFNLLFNVP VWIGVLIAGS STLLLLGLQR YGVRKLEFLV ALLVFVMAAC FFVEMSIVKP
201: PAKEVMKGLF IPRLNGSSAT ADAIALLGAL VMPHNLFLHS ALVLSRDTPA SVRGMNDACR FFLFESGIAL FVALLVNIAI ISVSGTVCNA GNLSLEDAAK
301: CGDLTLDSSS FLLKNVLGRS SAIVYGVALL ASGQSSSITG TYAGQYIMQG FLDIKMKKWV RNLMTRSIAI VPSLVVSIIG GPSGAGRLII IASMILSFEL
401: PFALIPLLKF SSSRNKMGQC NNSIYIVGFS WTLGFIIIGI NVYFLSSKLI GWILHNSLPT YANVLVGITL FPLMLLYIAA VVYLTFRKDT VKFMSRRELQ
501: DIDDTEKAKV ANEGGIEDDI VVQSK
101: GRHLAELCKS EYPVWVKICL WLLAEVAVIA ADIPEVIGTA FAFNLLFNVP VWIGVLIAGS STLLLLGLQR YGVRKLEFLV ALLVFVMAAC FFVEMSIVKP
201: PAKEVMKGLF IPRLNGSSAT ADAIALLGAL VMPHNLFLHS ALVLSRDTPA SVRGMNDACR FFLFESGIAL FVALLVNIAI ISVSGTVCNA GNLSLEDAAK
301: CGDLTLDSSS FLLKNVLGRS SAIVYGVALL ASGQSSSITG TYAGQYIMQG FLDIKMKKWV RNLMTRSIAI VPSLVVSIIG GPSGAGRLII IASMILSFEL
401: PFALIPLLKF SSSRNKMGQC NNSIYIVGFS WTLGFIIIGI NVYFLSSKLI GWILHNSLPT YANVLVGITL FPLMLLYIAA VVYLTFRKDT VKFMSRRELQ
501: DIDDTEKAKV ANEGGIEDDI VVQSK
001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
Arabidopsis Description
NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.