Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G227900.1 | Wheat | plasma membrane | 98.29 | 98.29 |
| TraesCS7A01G327300.1 | Wheat | plasma membrane | 97.33 | 97.33 |
| HORVU7Hr1G078330.2 | Barley | peroxisome, plasma membrane | 93.71 | 95.53 |
| Os07t0258400-01 | Rice | plasma membrane | 81.52 | 82.63 |
| EER96161 | Sorghum | cytosol, plasma membrane, vacuole | 75.81 | 75.81 |
| TraesCS4D01G299400.1 | Wheat | plasma membrane | 75.62 | 73.79 |
| GSMUA_Achr5P25950_001 | Banana | cytosol, nucleus, plasma membrane | 58.48 | 70.9 |
| Zm00001d005479_P001 | Maize | plasma membrane | 74.67 | 66.89 |
| PGSC0003DMT400023921 | Potato | cytosol, peroxisome, plasma membrane | 66.86 | 66.23 |
| Solyc11g018530.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 66.86 | 66.23 |
| KRH53274 | Soybean | plastid | 67.43 | 65.07 |
| VIT_18s0001g02120.t01 | Wine grape | plasma membrane | 66.29 | 64.21 |
| GSMUA_Achr11P... | Banana | cytosol | 61.71 | 62.31 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 65.71 | 62.27 |
| VIT_18s0001g02140.t01 | Wine grape | plasma membrane | 58.29 | 61.94 |
| VIT_00s0218g00100.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 56.38 | 58.04 |
| TraesCS7D01G451900.1 | Wheat | plasma membrane | 56.38 | 54.01 |
| TraesCS3D01G206000.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.95 | 47.33 |
| VIT_18s0001g02130.t01 | Wine grape | plastid | 18.1 | 46.8 |
| TraesCS4D01G254100.1 | Wheat | cytosol, plasma membrane, vacuole | 34.1 | 34.49 |
| TraesCS4D01G076500.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.29 | 33.96 |
| TraesCS5D01G084900.1 | Wheat | plasma membrane | 35.24 | 33.82 |
| TraesCS5D01G166000.1 | Wheat | plasma membrane | 21.71 | 9.19 |
| TraesCS4D01G036000.3 | Wheat | plasma membrane | 18.48 | 8.0 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G324000.1 | EnsemblPlantsGene:TraesCS7D01G324000 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0034755 | GO:GO:0046873 |
| HAMAP:MF_00221 | InterPro:NRAMP_fam | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF41 | PFAM:PF01566 | PRINTS:PR00447 |
| SEG:seg | TIGRFAMs:TIGR01197 | TMHMM:TMhelix | MapMan:24.2.3.10 | : | : |
Description
No Description!
Coordinates
chr7D:+:413690582..413693055
Molecular Weight (calculated)
56878.2 Da
IEP (calculated)
8.050
GRAVY (calculated)
0.577
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHNRETRAV SGKEEVDIEA VAGLRGDGSG VNSQDPAWKR FLRHIGPGFM VSLAYLDPGN LETDLQAGAN HRYELLWVIL IGLVFALIIQ SLSANLGVVT
101: GRHLAELCKS EYPVWVKICL WLLAEVAVIA ADIPEVIGTA FAFNLLFNIP VWIGVLIAGS STLLLLGLQR YGVRKLEFLV ALLVFVMAAC FFVEMSIVKP
201: PAKEVMKGLF IPRLNGSSAT ADAIALLGAL VMPHNLFLHS ALVLSRDTPA SVRGMNDACR FFLFESGIAL FVALLVNIAI ISVSGTVCNA GNLSPEDAAK
301: CGDLTLDSSS FLLKNVLGRS SAIVYGVALL ASGQSSSITG TYAGQYIMQG FLDIKMKKWV RNLMTRSIAI VPSLVVSIIG GSSGAGRLII IASMILSFEL
401: PFALIPLLKF SSSRNKMGQC NNSIYIVGFS WTLGFIIIGI NVYFLSSKLI GWILHNSLPT YANVLVGVTL FPLMLLYVAA VVYLTFRKDT VKFMSRRELQ
501: DIDDTEKAKV ANEGGSEEDR VVQSN
101: GRHLAELCKS EYPVWVKICL WLLAEVAVIA ADIPEVIGTA FAFNLLFNIP VWIGVLIAGS STLLLLGLQR YGVRKLEFLV ALLVFVMAAC FFVEMSIVKP
201: PAKEVMKGLF IPRLNGSSAT ADAIALLGAL VMPHNLFLHS ALVLSRDTPA SVRGMNDACR FFLFESGIAL FVALLVNIAI ISVSGTVCNA GNLSPEDAAK
301: CGDLTLDSSS FLLKNVLGRS SAIVYGVALL ASGQSSSITG TYAGQYIMQG FLDIKMKKWV RNLMTRSIAI VPSLVVSIIG GSSGAGRLII IASMILSFEL
401: PFALIPLLKF SSSRNKMGQC NNSIYIVGFS WTLGFIIIGI NVYFLSSKLI GWILHNSLPT YANVLVGVTL FPLMLLYVAA VVYLTFRKDT VKFMSRRELQ
501: DIDDTEKAKV ANEGGSEEDR VVQSN
001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD
Arabidopsis Description
NRAMP1Metal transporter Nramp1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.