Factsheet for GSMUA_Achr11P26320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25950_001	Banana	cytosol, nucleus, plasma membrane	75.38	90.53
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	79.04	74.19
Solyc11g018530.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.19	68.87
VIT_18s0001g02120.t01	Wine grape	plasma membrane	71.35	68.45
PGSC0003DMT400023921	Potato	cytosol, peroxisome, plasma membrane	69.62	68.3
OQU88782	Sorghum	cytosol, peroxisome, plasma membrane	70.0	68.04
Os07t0257200-01	Rice	cytosol, peroxisome, plasma membrane	70.38	68.03
KRH53274	Soybean	plastid	71.15	68.01
TraesCS4D01G299400.1	Wheat	plasma membrane	69.62	67.29
TraesCS4A01G004400.1	Wheat	plasma membrane	69.81	67.22
TraesCS4B01G300600.1	Wheat	plasma membrane	69.42	66.85
HORVU4Hr1G077510.1	Barley	plasma membrane	69.62	66.79
Zm00001d019327_P001	Maize	cytosol, peroxisome, plasma membrane	63.85	63.72
VIT_18s0001g02140.t01	Wine grape	plasma membrane	60.38	63.56
HORVU7Hr1G078330.2	Barley	peroxisome, plasma membrane	62.5	63.11
EER96161	Sorghum	cytosol, plasma membrane, vacuole	62.69	62.1
Os07t0258400-01	Rice	plasma membrane	61.54	61.78
TraesCS7D01G324000.1	Wheat	plasma membrane	62.31	61.71
TraesCS7B01G227900.1	Wheat	plasma membrane	62.31	61.71
TraesCS7A01G327300.1	Wheat	plasma membrane	62.12	61.52
VIT_00s0218g00100.t01	Wine grape	endoplasmic reticulum, plasma membrane	56.35	57.45
Zm00001d005479_P001	Maize	plasma membrane	62.31	55.29
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	55.77	53.41
VIT_18s0001g02130.t01	Wine grape	plastid	19.62	50.25
GSMUA_Achr6P07820_001	Banana	cytosol, plasma membrane, vacuole	32.88	38.6
GSMUA_Achr9P26850_001	Banana	plasma membrane	29.62	36.32
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	31.73	35.41
GSMUA_Achr3P18820_001	Banana	cytosol, peroxisome, plasma membrane	30.77	33.61
GSMUA_Achr9P10350_001	Banana	plasma membrane	19.42	8.37
GSMUA_Achr6P31160_001	Banana	plasma membrane	19.81	8.1
GSMUA_Achr7P01280_001	Banana	plasma membrane	19.62	6.89

Protein Annotations

MapMan:24.2.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	EnsemblPlantsGene:GSMUA_Achr11G26320_001	EnsemblPlants:GSMUA_Achr11P26320_001
EnsemblPlants:GSMUA_Achr11T26320_001	UniProt:M0RVL2	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF38	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0002948930	SEG:seg

Description

Metal transporter Nramp6 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26320_001]

Coordinates

chr11:-:25173781..25177073

Molecular Weight (calculated)

56019.8 Da

IEP (calculated)

6.186

GRAVY (calculated)

0.506

Length

520 amino acids

Sequence
(BLAST)

001: MELHEGREIR RDGAHGRGSR RVAAAEEEIN GLPAVKASSV ETSDMNKDES QELKAGWKKF LAHVGPGFLV SLAYLDPGNL ETDLQAGANH RYEDSCLNSL
101: DLNLFVWILL WVILIGLIFA LIIQSLAANL GVTTGKHLAE LCKAEYPKFV KYCLWVVAEL AVIAADIPEV IGTSFALNIL FHIPVWAGVL ITGLSTLLLL
201: GLQRYGVRKL ELLISVLVFV MAACFFGELS YVKPPASEVI RGLFVPRLKG DSATSDAIAL LGALVMPHNL FLHSALVLSR KTPPSVKGIN VACRYFLLES
301: GFALLVALLI NIAVVSVSGT VCATDNLSSD DSDTCSDLTL NSASFLLKNV LGKSSSIVYG IALLASGQSS TITGTYAGQY IMQGFLDIKM RMWLQNLMTR
401: CVAIGPSLIV SIIGGSAGAG KLIIIASMIL SFELPFALIP LLKFSSSRTK MGPHKNSVFI IVISWILGVG LIGINIYFLS TSFSDSSQIE MEDGVHPSDG
501: NKATEVMPYR EDLADIPLPD

Best Arabidopsis Sequence Match ( AT1G15960.1 )
(BLAST)

001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN

Arabidopsis Description

NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.