Factsheet for Os07t0258400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G078330.2	Barley	peroxisome, plasma membrane	81.47	81.94
TraesCS7D01G324000.1	Wheat	plasma membrane	82.63	81.52
TraesCS7B01G227900.1	Wheat	plasma membrane	82.63	81.52
TraesCS7A01G327300.1	Wheat	plasma membrane	82.24	81.14
EER96161	Sorghum	cytosol, plasma membrane, vacuole	77.99	76.95
Os07t0257200-01	Rice	cytosol, peroxisome, plasma membrane	73.55	70.82
GSMUA_Achr5P25950_001	Banana	cytosol, nucleus, plasma membrane	58.3	69.75
Zm00001d005479_P001	Maize	plasma membrane	77.03	68.09
Solyc11g018530.1.1	Tomato	cytosol, peroxisome, plasma membrane	66.99	65.47
PGSC0003DMT400023921	Potato	cytosol, peroxisome, plasma membrane	66.99	65.47
KRH53274	Soybean	plastid	68.15	64.89
VIT_18s0001g02120.t01	Wine grape	plasma membrane	67.37	64.39
GSMUA_Achr11P...	Banana	cytosol	61.78	61.54
VIT_18s0001g02140.t01	Wine grape	plasma membrane	58.69	61.54
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	64.48	60.29
VIT_00s0218g00100.t01	Wine grape	endoplasmic reticulum, plasma membrane	55.98	56.86
Os06t0676000-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	57.34	54.0
Os01t0503400-03	Rice	plasma membrane	50.19	47.27
VIT_18s0001g02130.t01	Wine grape	plastid	17.37	44.34
Os03t0208500-01	Rice	plasma membrane	33.98	33.59
Os12t0581600-01	Rice	cytosol, nucleus, plasma membrane	34.36	32.9
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	13.51	32.11
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	7.34	30.89
Os03t0607400-01	Rice	cytosol, peroxisome, plasma membrane, plastid	11.97	28.7
Os07t0155600-01	Rice	cytosol, peroxisome, plasma membrane	22.2	8.98
Os03t0700800-01	Rice	plasma membrane	21.43	8.55
Os07t0156732-01	Rice	nucleus	1.93	1.66
Os07t0157401-01	Rice	nucleus	1.93	1.66

Protein Annotations

MapMan:24.2.3.10	EntrezGene:4342862	UniProt:A0A1Y1B854	ProteinID:BAC83021.1	ProteinID:BAF21229.1	ProteinID:BAT00879.1
ProteinID:BAX56194.1	EMBL:DQ431468	ProteinID:EEE66907.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005381
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0030001	GO:GO:0034755	GO:GO:0046873	GO:GO:0055072	HAMAP:MF_00221	InterPro:NRAMP_fam
EnsemblPlantsGene:Os07g0258400	EnsemblPlants:Os07t0258400-01	PFAM:PF01566	PRINTS:PR00447	PANTHER:PTHR11706	PANTHER:PTHR11706:SF41
UniProt:Q0D7E4	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0000E12A6B	RefSeq:XP_015647629.1	SEG:seg

Description

BACTERIOCIDE EFFECT 1OsNramp1 (Integral membrane protein). (Os07t0258400-01);Similar to Metal transporter. (Os07t0258400-02);Integral membrane protein, Metal ion transport (Os07t0258400-03)

Coordinates

chr7:+:8966025..8970856

Molecular Weight (calculated)

55817.3 Da

IEP (calculated)

7.758

GRAVY (calculated)

0.684

Length

518 amino acids

Sequence
(BLAST)

001: MGVTKAEAVA GDGGKVVDDI EALADLRKEP AWKRFLSHIG PGFMVCLAYL DPGNMETDLQ AGANHKYELL WVILIGLIFA LIIQSLSANL GVVTGRHLAE
101: LCKTEYPVWV KTCLWLLAEL AVIASDIPEV IGTGFAFNLL FHIPVWTGVL IAGSSTLLLL GLQRYGVRKL EVVVALLVFV MAGCFFVEMS IVKPPVNEVL
201: QGLFIPRLSG PGATGDSIAL LGALVMPHNL FLHSALVLSR NTPASAKGMK DVCRFFLFES GIALFVALLV NIAIISVSGT VCNATNLSPE DAVKCSDLTL
301: DSSSFLLRNV LGKSSATVYG VALLASGQSS TITGTYAGQY VMQGFLDIKM KQWLRNLMTR SIAIVPSLIV SIIGGSSGAG RLIVIASMIL SFELPFALIP
401: LLKFSSSSNK MGENKNSIYI VGFSWVLGFV IIGINIYFLS TKLVGWILHN ALPTFANVLI GIVLFPLMLL YVVAVIYLTF RKDTVKFVSR RELQAGDDTE
501: KAQVATCVAD EHSKEPPV

Best Arabidopsis Sequence Match ( AT1G80830.2 )
(BLAST)

001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD

Arabidopsis Description

NRAMP1Metal transporter Nramp1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.