Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 2
  • golgi 2
  • mitochondrion 2
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, peroxisome
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:secretory
TargetP:mitochondrion
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0607400-01 Rice cytosol, peroxisome, plasma membrane, plastid 30.28 30.56
Solyc04g078240.1.1 Tomato cytosol 20.18 27.33
TraesCS4B01G078000.1 Wheat cytosol, peroxisome, plasma membrane 60.09 24.67
TraesCS4A01G237200.1 Wheat cytosol, peroxisome, plasma membrane 59.63 24.48
Os12t0581600-01 Rice cytosol, nucleus, plasma membrane 60.09 24.21
TraesCS4D01G076500.1 Wheat cytosol, peroxisome, plasma membrane 58.72 24.15
Zm00001d033367_P001 Maize cytosol, nucleus, plasma membrane 59.63 24.07
HORVU4Hr1G013220.1 Barley mitochondrion, peroxisome, plasma membrane 60.55 24.04
KXG38042 Sorghum cytosol, nucleus, plasma membrane 59.63 23.81
GSMUA_Achr4P32750_001 Banana peroxisome, plasma membrane, vacuole 50.0 23.39
VIT_18s0001g09490.t01 Wine grape cytosol, peroxisome, plasma membrane 57.34 23.32
AT1G47240.1 Thale cress plasma membrane 56.42 23.21
CDY17036 Canola cytosol, nucleus, plasma membrane 55.96 23.15
Bra040791.1-P Field mustard cytosol, nucleus, plasma membrane 55.96 23.15
CDY47594 Canola cytosol, nucleus, plasma membrane 55.96 23.15
Bra040711.1-P Field mustard cytosol, peroxisome, plasma membrane 56.42 23.12
CDY17090 Canola cytosol, peroxisome, plasma membrane 55.96 22.89
KRH52059 Soybean cytosol, nucleus, plasma membrane 54.59 22.8
KRH61379 Soybean cytosol, peroxisome, plasma membrane 53.67 22.59
PGSC0003DMT400059923 Potato cytosol, peroxisome, plasma membrane 53.67 22.59
Os03t0208500-01 Rice plasma membrane 53.21 22.14
PGSC0003DMT400055473 Potato cytosol, peroxisome, plasma membrane 54.59 22.04
CDY64917 Canola cytosol, plasma membrane, plastid 53.67 22.03
Bra012577.1-P Field mustard cytosol, plasma membrane, plastid 53.67 21.99
GSMUA_Achr9P26850_001 Banana plasma membrane 42.66 21.93
CDY62556 Canola plasma membrane 53.21 21.8
Solyc04g078250.2.1 Tomato cytosol, nucleus, plasma membrane 51.38 21.58
AT4G18790.1 Thale cress plasma membrane 51.38 21.13
CDY06751 Canola plasma membrane 40.37 21.0
Os01t0733001-00 Rice endoplasmic reticulum, nucleus 11.47 20.33
KRH47958 Soybean cytosol, nucleus, plasma membrane 48.62 19.03
KRH06520 Soybean cytosol, nucleus, plasma membrane 48.17 18.78
Os07t0258400-01 Rice plasma membrane 32.11 13.51
Os07t0257200-01 Rice cytosol, peroxisome, plasma membrane 33.03 13.38
Os06t0676000-01 Rice cytosol, mitochondrion, plasma membrane, plastid 32.57 12.91
Os01t0503400-03 Rice plasma membrane 28.44 11.27
Solyc04g078230.1.1 Tomato cytosol, extracellular, plastid 4.59 6.13
Os03t0700800-01 Rice plasma membrane 16.51 2.77
Os07t0155600-01 Rice cytosol, peroxisome, plasma membrane 15.6 2.65
Os07t0157401-01 Rice nucleus 0.92 0.33
Os07t0156732-01 Rice nucleus 0.92 0.33
Protein Annotations
EnsemblPlants:Os03t0606600-00EnsemblPlantsGene:Os03g0606600GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0030001GO:GO:0046873InterPro:NRAMP_fam
PANTHER:PTHR11706PANTHER:PTHR11706:SF51PFAM:PF01566PRINTS:PR00447ProteinID:BAS85230.1SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000393C5AAUniProt:A0A0P0W028MapMan:35.1::
Description
Hypothetical conserved gene. (Os03t0606600-00)
Coordinates
chr3:-:22799861..22803963
Molecular Weight (calculated)
24269.0 Da
IEP (calculated)
10.611
GRAVY (calculated)
0.153
Length
218 amino acids
Sequence
(BLAST)
001: TTAMGLLVQL LSARLRVATG RHLAELCRGG YPDWAHRALW LVAEVAMVSA DIQEVIRSAV AIRILSHGFM PLWAGVVITG LDCFIFLSLE NYGVRKLEGL
101: FAVLIATMAL SFAWMFIEIK PNGKDLIIGI LVPKLSSRTN KASGWACRMR YHASQCVPPF CSCTVKKNRS RQRTPGPRSA EVLHHRIHRG IGSALHDKSV
201: CDNSFCKGVL WHQRGRQH
Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.