Factsheet for Bra040711.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17090	Canola	cytosol, peroxisome, plasma membrane	98.12	97.94
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	95.86	96.77
AT1G47240.1	Thale cress	plasma membrane	93.23	93.58
KRH61379	Soybean	cytosol, peroxisome, plasma membrane	74.62	76.64
KRH52059	Soybean	cytosol, nucleus, plasma membrane	75.0	76.44
GSMUA_Achr9P26850_001	Banana	plasma membrane	58.46	73.35
PGSC0003DMT400055473	Potato	cytosol, peroxisome, plasma membrane	72.37	71.3
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	68.23	71.04
PGSC0003DMT400059923	Potato	cytosol, peroxisome, plasma membrane	67.11	68.92
Bra012154.1-P	Field mustard	peroxisome	65.6	68.16
TraesCS5D01G084900.1	Wheat	plasma membrane	69.92	68.01
TraesCS5B01G078700.1	Wheat	cytosol, plasma membrane, vacuole	69.74	67.82
TraesCS5A01G072200.1	Wheat	cytosol, plasma membrane, vacuole	69.55	67.64
HORVU5Hr1G018850.2	Barley	cytosol, nucleus, plasma membrane	69.55	67.64
Solyc04g078250.2.1	Tomato	cytosol, nucleus, plasma membrane	65.98	67.63
EES17269	Sorghum	cytosol, peroxisome, plasma membrane	68.61	67.1
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	66.73	66.73
Os12t0581600-01	Rice	cytosol, nucleus, plasma membrane	67.86	66.73
Zm00001d048129_P004	Maize	cytosol, peroxisome, plasma membrane	63.91	65.89
EER92665	Sorghum	cytosol, peroxisome, plasma membrane	63.91	65.89
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	57.71	65.88
HORVU4Hr1G069320.1	Barley	vacuole	64.47	65.71
GSMUA_Achr6P07820_001	Banana	cytosol, plasma membrane, vacuole	54.7	65.69
TraesCS4D01G076500.1	Wheat	cytosol, peroxisome, plasma membrane	65.41	65.66
TraesCS4A01G237200.1	Wheat	cytosol, peroxisome, plasma membrane	65.41	65.54
TraesCS4D01G254100.1	Wheat	cytosol, plasma membrane, vacuole	63.91	65.51
TraesCS4B01G078000.1	Wheat	cytosol, peroxisome, plasma membrane	65.23	65.35
TraesCS4B01G254300.1	Wheat	cytosol, plasma membrane, vacuole	63.91	65.26
TraesCS4A01G050500.1	Wheat	cytosol, peroxisome, plasma membrane	63.72	65.07
Os03t0208500-01	Rice	plasma membrane	63.53	64.5
Zm00001d030846_P001	Maize	plasma membrane	67.86	63.78
HORVU4Hr1G013220.1	Barley	mitochondrion, peroxisome, plasma membrane	64.85	62.84
Zm00001d033367_P001	Maize	cytosol, nucleus, plasma membrane	63.72	62.78
GSMUA_Achr3P18820_001	Banana	cytosol, peroxisome, plasma membrane	56.02	62.6
KXG38042	Sorghum	cytosol, nucleus, plasma membrane	63.72	62.09
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	23.12	56.42
Os03t0607400-01	Rice	cytosol, peroxisome, plasma membrane, plastid	22.74	56.02
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	11.09	47.97
Bra026089.1-P	Field mustard	plasma membrane	31.58	35.9
Bra035149.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.21	35.07
Bra008437.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	34.4	34.4
Bra003587.1-P	Field mustard	cytosol, plastid, vacuole	33.83	34.16
Bra033988.1-P	Field mustard	plasma membrane	31.02	30.39
Bra039185.1-P	Field mustard	cytosol	68.8	28.15
Bra009539.1-P	Field mustard	plasma membrane	19.55	7.93

Protein Annotations

MapMan:24.2.3.10	EnsemblPlantsGene:Bra040711	EnsemblPlants:Bra040711.1	EnsemblPlants:Bra040711.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	UniProt:M4FHY2	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI000253E7D8	SEG:seg

Description

AT1G47240 (E=6e-259) NRAMP2, ATNRAMP2 | NRAMP2; inorganic anion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrScaffold000238:-:6970..8942

Molecular Weight (calculated)

58330.5 Da

IEP (calculated)

4.946

GRAVY (calculated)

0.488

Length

532 amino acids

Sequence
(BLAST)

001: MENDVKVAEK VEEADRLLPP PQSLPSNSDE EESESESEAA FESRDKIVIV DFESAGDPAA APPFSWRKLW LFTGPGFLMS IAFLDPGNLE GDLQAGAIAG
101: YSLLWLLMWA TAMGLLIQML SARVGVATGR HLAELCRDEY PAWARYVLWS MAELALVGAD IQEVIGSAIA IQILSRGVLP LWAGVVITAS DCFLFLFLEN
201: YGVRKLEAVF AVLIATMGLS FAWMFGETKP SGKELMIGIL LPRLSSKTIR QAVGVVGCVI MPHNVFLHSA LVQSRQIDPK RKSRVQEALN YYLIDSSLAL
301: FISFMINLFV TTVFAKGFYG TEKANNIGLV NAGQYLQEKF GGGLLPILYI WGIGLLAAGQ SSTITGTYAG QFIMGGFLNP RLKKWMRAVI TRSCAIVPTM
401: IVAIVFNTSE ASLDVLNEWL NVLQSVQIPF ALLPLLTLVS KEEVMGDFKI GPILQRIAWT VAALVMIING YLLLDFFVSE VNGFMFGVTV CVWTTAYVAF
501: IVYLISHSNF IPSPWSSSSS IELPKRVTVS NS

Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)

001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS

Arabidopsis Description

NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.