Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • plastid 1
  • vacuole 3
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P18820_001 Banana cytosol, peroxisome, plasma membrane 75.62 70.38
GSMUA_Achr4P32750_001 Banana peroxisome, plasma membrane, vacuole 69.98 66.52
GSMUA_Achr9P26850_001 Banana plasma membrane 63.43 66.27
Zm00001d048129_P004 Maize cytosol, peroxisome, plasma membrane 72.01 61.82
EER92665 Sorghum cytosol, peroxisome, plasma membrane 72.01 61.82
Os03t0208500-01 Rice plasma membrane 71.56 60.5
TraesCS4D01G254100.1 Wheat cytosol, plasma membrane, vacuole 70.65 60.31
HORVU4Hr1G069320.1 Barley vacuole 70.88 60.15
TraesCS4B01G254300.1 Wheat cytosol, plasma membrane, vacuole 70.65 60.08
TraesCS4A01G050500.1 Wheat cytosol, peroxisome, plasma membrane 70.65 60.08
CDY06751 Canola plasma membrane 55.08 58.23
KRH61379 Soybean cytosol, peroxisome, plasma membrane 66.59 56.95
VIT_18s0001g09490.t01 Wine grape cytosol, peroxisome, plasma membrane 68.62 56.72
KRH52059 Soybean cytosol, nucleus, plasma membrane 66.82 56.7
Solyc04g078230.1.1 Tomato cytosol, extracellular, plastid 20.77 56.44
Bra040791.1-P Field mustard cytosol, nucleus, plasma membrane 66.37 55.79
AT1G47240.1 Thale cress plasma membrane 66.59 55.66
CDY47594 Canola cytosol, nucleus, plasma membrane 66.14 55.6
CDY17090 Canola cytosol, peroxisome, plasma membrane 66.82 55.53
CDY17036 Canola cytosol, nucleus, plasma membrane 65.91 55.41
Bra040711.1-P Field mustard cytosol, peroxisome, plasma membrane 65.69 54.7
PGSC0003DMT400059923 Potato cytosol, peroxisome, plasma membrane 63.88 54.63
PGSC0003DMT400055473 Potato cytosol, peroxisome, plasma membrane 65.24 53.52
Solyc04g078250.2.1 Tomato cytosol, nucleus, plasma membrane 60.27 51.45
CDY62556 Canola plasma membrane 60.05 50.0
Bra012577.1-P Field mustard cytosol, plasma membrane, plastid 60.05 50.0
CDY64917 Canola cytosol, plasma membrane, plastid 59.82 49.91
AT4G18790.1 Thale cress plasma membrane 59.14 49.43
KRH06520 Soybean cytosol, nucleus, plasma membrane 61.63 48.84
KRH47958 Soybean cytosol, nucleus, plasma membrane 61.4 48.83
Solyc04g078240.1.1 Tomato cytosol 13.77 37.89
GSMUA_Achr5P25950_001 Banana cytosol, nucleus, plasma membrane 37.02 37.88
GSMUA_Achr11P... Banana cytosol 38.6 32.88
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 39.95 32.6
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 39.05 31.23
GSMUA_Achr9P10350_001 Banana plasma membrane 18.74 6.88
GSMUA_Achr6P31160_001 Banana plasma membrane 18.74 6.53
GSMUA_Achr7P01280_001 Banana plasma membrane 18.74 5.61
Protein Annotations
EnsemblPlants:GSMUA_Achr6P07820_001EnsemblPlants:GSMUA_Achr6T07820_001EnsemblPlantsGene:GSMUA_Achr6G07820_001GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0030001GO:GO:0046873
InterPro:NRAMP_famPANTHER:PTHR11706PANTHER:PTHR11706:SF51PFAM:PF01566PRINTS:PR00447SEG:seg
TIGRFAMs:TIGR01197TMHMM:TMhelixUniParc:UPI0002951D78UniProt:M0T531MapMan:24.2.3.10:
Description
Metal transporter Nramp3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G07820_001]
Coordinates
chr6:-:5273880..5277221
Molecular Weight (calculated)
48279.0 Da
IEP (calculated)
8.985
GRAVY (calculated)
0.741
Length
443 amino acids
Sequence
(BLAST)
001: MSIAFLDPGN LEGDLQAGAA AGLGVATGRH LAELCGDEYP RWATVALWLM AELALIGADI QEVVGSAIAI KILSGGVIPL WAGVVITALD CLVFLFLEDY
101: GVRKLEAFFG VLIATMAVSF AVMFGETKPS FKGLLIGAVV PKLSSSTIRQ AVGIVGCIIM PHNLFLHSAL VQSRKIDNYK KSHVREAMKY YSIESTVALA
201: VSFFINVCVT TIFAKGFYGT EAASSIGLEN AGHFLQERYG GAFPILYVWG IGLLASGQSS TITGTYAGQF IMGGFLNLRL KKWVRSVITR SFAILPAMVV
301: ALLFDTKGSA MDILNESLNV LQSIQIPFAL IPLLTLVSKE QVMGIFRIGT ITKVVTWIVA GFLIVINGYL LLDFFSAEVH GVLFNSLLSL ILSLYVMFIV
401: YLVLWGSTLY AWVTIAIRKS FRKKLSDVHN GKHMENIVYK FVW
Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.