Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 98.86 | 98.86 |
| Bra040791.1-P | Field mustard | cytosol, nucleus, plasma membrane | 98.67 | 98.67 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 96.77 | 95.68 |
| AT1G47240.1 | Thale cress | plasma membrane | 93.74 | 93.21 |
| CDY06751 | Canola | plasma membrane | 70.97 | 89.26 |
| KRH61379 | Soybean | cytosol, peroxisome, plasma membrane | 76.28 | 77.61 |
| KRH52059 | Soybean | cytosol, nucleus, plasma membrane | 76.28 | 77.01 |
| GSMUA_Achr9P26850_001 | Banana | plasma membrane | 59.2 | 73.58 |
| PGSC0003DMT400055473 | Potato | cytosol, peroxisome, plasma membrane | 73.62 | 71.85 |
| CDX76871 | Canola | cytosol, peroxisome, plasma membrane | 68.88 | 70.49 |
| CDY21478 | Canola | plasma membrane | 67.17 | 70.38 |
| PGSC0003DMT400059923 | Potato | cytosol, peroxisome, plasma membrane | 68.5 | 69.69 |
| CDY57441 | Canola | peroxisome | 67.17 | 69.14 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 67.17 | 68.21 |
| TraesCS5D01G084900.1 | Wheat | plasma membrane | 70.21 | 67.64 |
| TraesCS5B01G078700.1 | Wheat | cytosol, plasma membrane, vacuole | 70.02 | 67.46 |
| HORVU5Hr1G018850.2 | Barley | cytosol, nucleus, plasma membrane | 69.83 | 67.28 |
| TraesCS5A01G072200.1 | Wheat | cytosol, plasma membrane, vacuole | 69.83 | 67.28 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 67.74 | 67.23 |
| EES17269 | Sorghum | cytosol, peroxisome, plasma membrane | 69.26 | 67.1 |
| CDX83202 | Canola | plasma membrane | 68.31 | 66.91 |
| CDY62556 | Canola | plasma membrane | 67.36 | 66.73 |
| Os12t0581600-01 | Rice | cytosol, nucleus, plasma membrane | 68.12 | 66.36 |
| GSMUA_Achr4P32750_001 | Banana | peroxisome, plasma membrane, vacuole | 58.63 | 66.31 |
| GSMUA_Achr6P07820_001 | Banana | cytosol, plasma membrane, vacuole | 55.6 | 66.14 |
| EER92665 | Sorghum | cytosol, peroxisome, plasma membrane | 64.33 | 65.7 |
| HORVU4Hr1G069320.1 | Barley | vacuole | 64.71 | 65.33 |
| Zm00001d048129_P004 | Maize | cytosol, peroxisome, plasma membrane | 63.95 | 65.31 |
| TraesCS4D01G076500.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.65 | 65.28 |
| TraesCS4A01G237200.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.65 | 65.16 |
| TraesCS4D01G254100.1 | Wheat | cytosol, plasma membrane, vacuole | 64.14 | 65.13 |
| TraesCS4B01G078000.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.46 | 64.97 |
| TraesCS4B01G254300.1 | Wheat | cytosol, plasma membrane, vacuole | 64.14 | 64.88 |
| TraesCS4A01G050500.1 | Wheat | cytosol, peroxisome, plasma membrane | 63.76 | 64.49 |
| Os03t0208500-01 | Rice | plasma membrane | 63.57 | 63.93 |
| GSMUA_Achr3P18820_001 | Banana | cytosol, peroxisome, plasma membrane | 57.5 | 63.66 |
| Zm00001d030846_P001 | Maize | plasma membrane | 68.31 | 63.6 |
| HORVU4Hr1G013220.1 | Barley | mitochondrion, peroxisome, plasma membrane | 65.46 | 62.84 |
| Zm00001d033367_P001 | Maize | cytosol, nucleus, plasma membrane | 63.95 | 62.41 |
| KXG38042 | Sorghum | cytosol, nucleus, plasma membrane | 64.14 | 61.9 |
| CDY46091 | Canola | cytosol, nucleus, plastid | 22.01 | 60.42 |
| Os03t0606600-00 | Rice | extracellular, mitochondrion, peroxisome | 23.15 | 55.96 |
| Os03t0607400-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 22.77 | 55.56 |
| CDY12837 | Canola | nucleus | 67.17 | 53.15 |
| Os01t0733001-00 | Rice | endoplasmic reticulum, nucleus | 11.2 | 47.97 |
| CDY35055 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.68 | 43.97 |
| CDY33364 | Canola | cytosol, peroxisome, plasma membrane | 33.4 | 35.77 |
| CDX87346 | Canola | cytosol, peroxisome, plasma membrane | 34.72 | 35.26 |
| CDY39940 | Canola | cytosol, peroxisome, plasma membrane | 34.72 | 35.26 |
| CDY63970 | Canola | plastid | 35.1 | 34.77 |
| CDX79348 | Canola | cytosol, plasma membrane, vacuole | 34.16 | 34.22 |
| CDX67970 | Canola | plasma membrane | 30.17 | 32.85 |
| CDY35054 | Canola | extracellular | 6.64 | 32.41 |
| CDY35053 | Canola | mitochondrion, plasma membrane | 17.46 | 31.94 |
| CDY64859 | Canola | cytosol, peroxisome, plasma membrane, plastid | 35.1 | 27.82 |
| CDX70318 | Canola | plasma membrane | 18.98 | 8.35 |
| CDY10393 | Canola | plasma membrane | 18.79 | 8.28 |
Protein Annotations
| MapMan:24.2.3.10 | GO:A0A078IDZ7 | UniProt:A0A078IDZ7 | EnsemblPlants:CDY47594 | ProteinID:CDY47594 | ProteinID:CDY47594.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | EnsemblPlantsGene:GSBRNA2T00087707001 | HAMAP:MF_00221 | InterPro:NRAMP_fam |
| PFAM:PF01566 | PRINTS:PR00447 | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF46 | TIGRFAMs:TIGR01197 | TMHMM:TMhelix |
| UniParc:UPI0004EE2BFD | SEG:seg | : | : | : | : |
Description
BnaC08g04640DBnaC08g04640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDZ7]
Coordinates
chrLK032724:+:60695..63122
Molecular Weight (calculated)
58009.2 Da
IEP (calculated)
4.939
GRAVY (calculated)
0.506
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDVKVDEK VEEADRLLPP HSLPSNSDDE ESEVAFDARD KIVIVDFESA DDPSAAAPPF SWRKLWLFTG PGFLMSIAFL DPGNLEGDLQ AGAIAGYSLL
101: WLLMWATAMG LLIQMLSARV GVATGRHLAE LCRDEYPTWA RYVLWSMAEI ALIGADIQEV IGSAIAIQIL SRGVLPLWAG VVITASDCFL FLFLENYGVR
201: KLEAMFAVLI ATMGLSFAWM FGETKPSGKE LMIGILLPRL SSKTIRQAVG VVGCVIMPHN VFLHSALVQS RQIDPKRKSR VQEALNYYLI ESSVALFISF
301: MINLFVTTVF AKGFYGTEKA NNIGLVNAGQ YLQEKFGGGL LPILYIWGIG LLAAGQSSTI TGTYAGQFIM GGFLNLRLKK WMRAVITRSC AIVPTMIVAI
401: VFNTSEASLD VLNEWLNVLQ SVQIPFALLP LLTLVSKEEV MGDFKIGPVL QRIAWTVAAL VMIINGYLLL DFFVSEVNGF MFGVTVCVWT TAYVAFIVYL
501: ISHSNFFPSP WSSSSIELPK RVTVSDS
101: WLLMWATAMG LLIQMLSARV GVATGRHLAE LCRDEYPTWA RYVLWSMAEI ALIGADIQEV IGSAIAIQIL SRGVLPLWAG VVITASDCFL FLFLENYGVR
201: KLEAMFAVLI ATMGLSFAWM FGETKPSGKE LMIGILLPRL SSKTIRQAVG VVGCVIMPHN VFLHSALVQS RQIDPKRKSR VQEALNYYLI ESSVALFISF
301: MINLFVTTVF AKGFYGTEKA NNIGLVNAGQ YLQEKFGGGL LPILYIWGIG LLAAGQSSTI TGTYAGQFIM GGFLNLRLKK WMRAVITRSC AIVPTMIVAI
401: VFNTSEASLD VLNEWLNVLQ SVQIPFALLP LLTLVSKEEV MGDFKIGPVL QRIAWTVAAL VMIINGYLLL DFFVSEVNGF MFGVTVCVWT TAYVAFIVYL
501: ISHSNFFPSP WSSSSIELPK RVTVSDS
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.