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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G237200.1 Wheat cytosol, peroxisome, plasma membrane 99.06 99.06
TraesCS4D01G076500.1 Wheat cytosol, peroxisome, plasma membrane 98.49 98.68
HORVU4Hr1G013220.1 Barley mitochondrion, peroxisome, plasma membrane 96.05 92.9
TraesCS5B01G078700.1 Wheat cytosol, plasma membrane, vacuole 77.4 75.14
Zm00001d033367_P001 Maize cytosol, nucleus, plasma membrane 74.95 73.7
KXG38042 Sorghum cytosol, nucleus, plasma membrane 74.39 72.34
GSMUA_Achr9P26850_001 Banana plasma membrane 57.44 71.93
KRH61379 Soybean cytosol, peroxisome, plasma membrane 64.78 66.41
GSMUA_Achr4P32750_001 Banana peroxisome, plasma membrane, vacuole 58.19 66.31
CDY17036 Canola cytosol, nucleus, plasma membrane 64.97 65.46
CDY47594 Canola cytosol, nucleus, plasma membrane 64.97 65.46
Bra040791.1-P Field mustard cytosol, nucleus, plasma membrane 64.97 65.46
KRH52059 Soybean cytosol, nucleus, plasma membrane 64.22 65.33
Bra040711.1-P Field mustard cytosol, peroxisome, plasma membrane 65.35 65.23
AT1G47240.1 Thale cress plasma membrane 64.97 65.09
CDY17090 Canola cytosol, peroxisome, plasma membrane 64.97 64.73
VIT_18s0001g09490.t01 Wine grape cytosol, peroxisome, plasma membrane 64.97 64.37
TraesCS4B01G254300.1 Wheat cytosol, plasma membrane, vacuole 62.71 63.92
PGSC0003DMT400055473 Potato cytosol, peroxisome, plasma membrane 64.41 63.33
PGSC0003DMT400059923 Potato cytosol, peroxisome, plasma membrane 60.83 62.36
CDY06751 Canola plasma membrane 48.96 62.05
Solyc04g078250.2.1 Tomato cytosol, nucleus, plasma membrane 60.64 62.04
CDY64917 Canola cytosol, plasma membrane, plastid 60.83 60.83
Bra012577.1-P Field mustard cytosol, plasma membrane, plastid 60.45 60.34
CDY62556 Canola plasma membrane 60.26 60.15
Os03t0606600-00 Rice extracellular, mitochondrion, peroxisome 24.67 60.09
AT4G18790.1 Thale cress plasma membrane 58.76 58.87
Solyc04g078230.1.1 Tomato cytosol, extracellular, plastid 17.33 56.44
KRH47958 Soybean cytosol, nucleus, plasma membrane 57.82 55.12
KRH06520 Soybean cytosol, nucleus, plasma membrane 57.63 54.74
Os01t0733001-00 Rice endoplasmic reticulum, nucleus 11.86 51.22
Solyc04g078240.1.1 Tomato cytosol 14.69 48.45
TraesCS7B01G364800.1 Wheat plasma membrane 35.22 34.12
TraesCS7B01G227900.1 Wheat plasma membrane 33.71 34.1
TraesCS4B01G300600.1 Wheat plasma membrane 34.46 33.89
TraesCS3B01G230400.1 Wheat cytosol, peroxisome, plasma membrane 29.38 28.73
TraesCS4B01G381200.1 Wheat plasma membrane 16.01 17.45
TraesCS5B01G158500.1 Wheat plasma membrane 17.89 7.67
TraesCS4B01G038100.1 Wheat plasma membrane 16.2 7.11
TraesCS2B01G133000.1 Wheat plasma membrane 16.01 7.08
Protein Annotations
EnsemblPlants:TraesCS4B01G078000.1EnsemblPlantsGene:TraesCS4B01G078000GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0030001GO:GO:0046873HAMAP:MF_00221InterPro:NRAMP_fam
PANTHER:PTHR11706PANTHER:PTHR11706:SF46PFAM:PF01566PRINTS:PR00447SEG:segTIGRFAMs:TIGR01197
TMHMM:TMhelixMapMan:24.2.3.10::::
Description
No Description!
Coordinates
chr4B:-:75038155..75040959
Molecular Weight (calculated)
58077.9 Da
IEP (calculated)
4.736
GRAVY (calculated)
0.483
Length
531 amino acids
Sequence
(BLAST)
001: MAADGDPAAG AGPDVEAHAL LRASSSSSDE DPEQCAFEPA EKIVVSIAAD PDADEEDLFS ATGRAPPFSW RKLWLFTGPG FLMSIAFLDP GNLEGDLQAG
101: ATAGDTLLWL LLWATAMGLL VQLLAARLGV ATGKNLAELC RDEYPDWVRR ALWLMAEVSM VSADIQEVIG SAIAIKILSR GFLPIWAGVV ITALDCFIFL
201: SIENYGVRKL EALFAVLIAI MAWSFAWMFI ETKPNGKDLI VGLLVPKLSS RTLRQAVGIV GCVITPHNVF LHSALVQSRK VDQNKEYQVR EALRYYSIES
301: TMALVVPFMI NLFVTTVFAK GFYGTEEART IGLENAGQYL QEKFGGDYFP ILSIWGVGLL AAGTSSTITG TYAGQFIMDG FLNWRLKKWM RAMITRSFAI
401: VPTIVVALYF NASESALDVL NEWLNVLQSV QIPFSLIPLI TLVSKEQVMG VFKIGLTTQI VTWTVASLPI LINGYLLLDF FSSEIRGAVS GSFLCVAVVA
501: YAAFLLYLIL RCTELPNHVF TPVKNKDASF T
Best Arabidopsis Sequence Match ( AT1G15960.1 )
(BLAST)
001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
Arabidopsis Description
NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.