Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62556 | Canola | plasma membrane | 98.31 | 98.12 |
| AT4G18790.1 | Thale cress | plasma membrane | 90.58 | 90.75 |
| VIT_18s0001g09490.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.3 | 68.66 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 67.23 | 67.74 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 67.23 | 67.74 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 67.8 | 67.54 |
| GSMUA_Achr9P26850_001 | Banana | plasma membrane | 53.11 | 66.51 |
| PGSC0003DMT400059923 | Potato | cytosol, peroxisome, plasma membrane | 63.84 | 65.44 |
| PGSC0003DMT400055473 | Potato | cytosol, peroxisome, plasma membrane | 65.91 | 64.81 |
| CDY21478 | Canola | plasma membrane | 61.02 | 64.41 |
| CDX76871 | Canola | cytosol, peroxisome, plasma membrane | 62.34 | 64.27 |
| CDY06751 | Canola | plasma membrane | 50.66 | 64.2 |
| CDY57441 | Canola | peroxisome | 61.21 | 63.48 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 60.83 | 62.24 |
| Os12t0581600-01 | Rice | cytosol, nucleus, plasma membrane | 63.28 | 62.11 |
| TraesCS5D01G084900.1 | Wheat | plasma membrane | 63.47 | 61.61 |
| GSMUA_Achr4P32750_001 | Banana | peroxisome, plasma membrane, vacuole | 54.05 | 61.59 |
| EER92665 | Sorghum | cytosol, peroxisome, plasma membrane | 59.7 | 61.43 |
| Zm00001d048129_P004 | Maize | cytosol, peroxisome, plasma membrane | 59.7 | 61.43 |
| TraesCS5B01G078700.1 | Wheat | cytosol, plasma membrane, vacuole | 63.28 | 61.43 |
| EES17269 | Sorghum | cytosol, peroxisome, plasma membrane | 62.9 | 61.4 |
| TraesCS5A01G072200.1 | Wheat | cytosol, plasma membrane, vacuole | 63.09 | 61.24 |
| TraesCS4D01G076500.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.02 | 61.13 |
| TraesCS4A01G237200.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.02 | 61.02 |
| CDX83202 | Canola | plasma membrane | 61.77 | 60.97 |
| HORVU5Hr1G018850.2 | Barley | cytosol, nucleus, plasma membrane | 62.71 | 60.88 |
| TraesCS4B01G078000.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.83 | 60.83 |
| GSMUA_Achr6P07820_001 | Banana | cytosol, plasma membrane, vacuole | 49.91 | 59.82 |
| Zm00001d033367_P001 | Maize | cytosol, nucleus, plasma membrane | 60.83 | 59.81 |
| HORVU4Hr1G013220.1 | Barley | mitochondrion, peroxisome, plasma membrane | 61.58 | 59.56 |
| TraesCS4D01G254100.1 | Wheat | cytosol, plasma membrane, vacuole | 58.0 | 59.34 |
| TraesCS4A01G050500.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.0 | 59.12 |
| HORVU4Hr1G069320.1 | Barley | vacuole | 58.0 | 59.0 |
| TraesCS4B01G254300.1 | Wheat | cytosol, plasma membrane, vacuole | 57.82 | 58.93 |
| Os03t0208500-01 | Rice | plasma membrane | 58.0 | 58.78 |
| Zm00001d030846_P001 | Maize | plasma membrane | 62.34 | 58.48 |
| KXG38042 | Sorghum | cytosol, nucleus, plasma membrane | 60.08 | 58.42 |
| KRH47958 | Soybean | cytosol, nucleus, plasma membrane | 60.83 | 57.99 |
| KRH06520 | Soybean | cytosol, nucleus, plasma membrane | 61.02 | 57.96 |
| GSMUA_Achr3P18820_001 | Banana | cytosol, peroxisome, plasma membrane | 51.22 | 57.14 |
| Os03t0606600-00 | Rice | extracellular, mitochondrion, peroxisome | 22.03 | 53.67 |
| CDY46091 | Canola | cytosol, nucleus, plastid | 19.02 | 52.6 |
| Os03t0607400-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 21.28 | 52.31 |
| CDY12837 | Canola | nucleus | 61.58 | 49.1 |
| Os01t0733001-00 | Rice | endoplasmic reticulum, nucleus | 10.73 | 46.34 |
| CDY35055 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.42 | 43.1 |
| CDY33364 | Canola | cytosol, peroxisome, plasma membrane | 33.71 | 36.38 |
| CDX87346 | Canola | cytosol, peroxisome, plasma membrane | 35.22 | 36.03 |
| CDY39940 | Canola | cytosol, peroxisome, plasma membrane | 35.03 | 35.84 |
| CDY63970 | Canola | plastid | 34.84 | 34.77 |
| CDX79348 | Canola | cytosol, plasma membrane, vacuole | 34.27 | 34.6 |
| CDY35053 | Canola | mitochondrion, plasma membrane | 18.08 | 33.33 |
| CDX67970 | Canola | plasma membrane | 30.32 | 33.26 |
| CDY35054 | Canola | extracellular | 6.59 | 32.41 |
| CDY64859 | Canola | cytosol, peroxisome, plasma membrane, plastid | 35.03 | 27.97 |
| CDX70318 | Canola | plasma membrane | 18.27 | 8.1 |
| CDY10393 | Canola | plasma membrane | 18.08 | 8.03 |
Protein Annotations
| MapMan:24.2.3.10 | GO:A0A078JHN2 | UniProt:A0A078JHN2 | EnsemblPlants:CDY64917 | ProteinID:CDY64917 | ProteinID:CDY64917.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | EnsemblPlantsGene:GSBRNA2T00043859001 | HAMAP:MF_00221 | InterPro:NRAMP_fam |
| PFAM:PF01566 | PRINTS:PR00447 | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF46 | TIGRFAMs:TIGR01197 | TMHMM:TMhelix |
| UniParc:UPI0004EF1C30 | SEG:seg | : | : | : | : |
Description
BnaC07g50170DBnaC07g50170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHN2]
Coordinates
chrLK034599:+:9209..11517
Molecular Weight (calculated)
58470.6 Da
IEP (calculated)
4.917
GRAVY (calculated)
0.468
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPTVSRQV NSPLKRNESN GEFKRLLLPE TSQSDDPSES PAEPPENQVV TVEEDGETTL ESVPPFSWAK LWKFTGPGFL MSIAFLDPGN IEGDLQAGAV
101: AGYSLLWLLL WATLMGLLIQ LLSARIGVAT GRHLAEICRS QYPSWARILL WFMAEVALIG ADIQEVIGSA IALQILTRGF LPIWAGVIIT SLDCFLISYL
201: EKCGMRKLEG LFAVLIATMA LSFAWMFNET KPSGEELIIG ILIPKLGSKT IRQAVGVVGC VITPHNVFLH SALVQSRKTN PKDIHRVQEA LNYYNIESTA
301: ALFVSFMINL FVTAVFAKGF YGTKQADSIG LVNAGHYLQE KYGGGVFPIL YIWGIGLLAA GQSSTITGTY AGQFIMEGFL DLQMEQWLSA FITRSFAIVP
401: TMVVALMFNT SEGSLDVLNE WLNILQSMQI PFAVIPLLTM VSNEHIMGVF KIGPSLEKLA WTVAVFVMMI NGYLLLDFFM AAANGFFVGL LVFAGVVAYV
501: SFIIYLVSYR RSQFSSWSSL EMSQRVVSTE T
101: AGYSLLWLLL WATLMGLLIQ LLSARIGVAT GRHLAEICRS QYPSWARILL WFMAEVALIG ADIQEVIGSA IALQILTRGF LPIWAGVIIT SLDCFLISYL
201: EKCGMRKLEG LFAVLIATMA LSFAWMFNET KPSGEELIIG ILIPKLGSKT IRQAVGVVGC VITPHNVFLH SALVQSRKTN PKDIHRVQEA LNYYNIESTA
301: ALFVSFMINL FVTAVFAKGF YGTKQADSIG LVNAGHYLQE KYGGGVFPIL YIWGIGLLAA GQSSTITGTY AGQFIMEGFL DLQMEQWLSA FITRSFAIVP
401: TMVVALMFNT SEGSLDVLNE WLNILQSMQI PFAVIPLLTM VSNEHIMGVF KIGPSLEKLA WTVAVFVMMI NGYLLLDFFM AAANGFFVGL LVFAGVVAYV
501: SFIIYLVSYR RSQFSSWSSL EMSQRVVSTE T
001: MTGSTVSRQE NSPKRPNDSN GEFKRLLVPE TSQPEEDELH ESPPENQILN VEEDRDKTYD SVPPFSWAKL WKFTGPGFLM SIAFLDPGNI EGDLQAGAVA
101: GYSLLWLLLW ATLMGLLMQL LSARIGVATG RHLAEICRSE YPSWARILLW FMAEVALIGA DIQEVIGSAI ALQILTRGFL PIWVGVIITS FDCFLISYLE
201: KCGMRKLEGL FAVLIATMAL SFAWMFNETK PSVEELFIGI IIPKLGSKTI REAVGVVGCV ITPHNVFLHS ALVQSRKTDP KEINRVQEAL NYYTIESSAA
301: LFVSFMINLF VTAVFAKGFY GTKQADSIGL VNAGYYLQEK YGGGVFPILY IWGIGLLAAG QSSTITGTYA GQFIMEGFLD LQMEQWLSAF ITRSFAIVPT
401: MFVAIMFNTS EGSLDVLNEW LNILQSMQIP FAVIPLLTMV SNEHIMGVFK IGPSLEKLAW TVAVFVMMIN GYLLLDFFMA EVEGFLVGFL VFGGVVGYIS
501: FIIYLVSYRS SQSSSWSSLE MSERVVSTET
101: GYSLLWLLLW ATLMGLLMQL LSARIGVATG RHLAEICRSE YPSWARILLW FMAEVALIGA DIQEVIGSAI ALQILTRGFL PIWVGVIITS FDCFLISYLE
201: KCGMRKLEGL FAVLIATMAL SFAWMFNETK PSVEELFIGI IIPKLGSKTI REAVGVVGCV ITPHNVFLHS ALVQSRKTDP KEINRVQEAL NYYTIESSAA
301: LFVSFMINLF VTAVFAKGFY GTKQADSIGL VNAGYYLQEK YGGGVFPILY IWGIGLLAAG QSSTITGTYA GQFIMEGFLD LQMEQWLSAF ITRSFAIVPT
401: MFVAIMFNTS EGSLDVLNEW LNILQSMQIP FAVIPLLTMV SNEHIMGVFK IGPSLEKLAW TVAVFVMMIN GYLLLDFFMA EVEGFLVGFL VFGGVVGYIS
501: FIIYLVSYRS SQSSSWSSLE MSERVVSTET
Arabidopsis Description
NRAMP5Metal transporter Nramp5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN36]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.