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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, plasma membrane, vacuole
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G084900.1 Wheat plasma membrane 98.9 98.9
TraesCS5B01G078700.1 Wheat cytosol, plasma membrane, vacuole 98.9 98.9
HORVU5Hr1G018850.2 Barley cytosol, nucleus, plasma membrane 97.99 97.99
EES17269 Sorghum cytosol, peroxisome, plasma membrane 85.92 86.4
Os12t0581600-01 Rice cytosol, nucleus, plasma membrane 84.46 85.4
Zm00001d030846_P001 Maize plasma membrane 85.56 82.69
TraesCS4A01G237200.1 Wheat cytosol, peroxisome, plasma membrane 74.22 76.46
GSMUA_Achr9P26850_001 Banana plasma membrane 57.95 74.76
KRH61379 Soybean cytosol, peroxisome, plasma membrane 68.56 72.39
GSMUA_Achr4P32750_001 Banana peroxisome, plasma membrane, vacuole 61.43 72.1
KRH52059 Soybean cytosol, nucleus, plasma membrane 67.82 71.07
Os03t0607400-01 Rice cytosol, peroxisome, plasma membrane, plastid 27.97 70.83
AT1G47240.1 Thale cress plasma membrane 68.01 70.19
VIT_18s0001g09490.t01 Wine grape cytosol, peroxisome, plasma membrane 68.74 70.15
CDY47594 Canola cytosol, nucleus, plasma membrane 67.28 69.83
Bra040791.1-P Field mustard cytosol, nucleus, plasma membrane 67.09 69.64
CDY17036 Canola cytosol, nucleus, plasma membrane 67.09 69.64
Bra040711.1-P Field mustard cytosol, peroxisome, plasma membrane 67.64 69.55
CDY17090 Canola cytosol, peroxisome, plasma membrane 67.64 69.42
PGSC0003DMT400055473 Potato cytosol, peroxisome, plasma membrane 67.09 67.96
TraesCS4A01G050500.1 Wheat cytosol, peroxisome, plasma membrane 64.17 67.37
Solyc04g078250.2.1 Tomato cytosol, nucleus, plasma membrane 63.44 66.86
CDY06751 Canola plasma membrane 50.82 66.35
PGSC0003DMT400059923 Potato cytosol, peroxisome, plasma membrane 62.16 65.64
CDY62556 Canola plasma membrane 61.43 63.16
CDY64917 Canola cytosol, plasma membrane, plastid 61.24 63.09
Bra012577.1-P Field mustard cytosol, plasma membrane, plastid 61.24 62.97
AT4G18790.1 Thale cress plasma membrane 60.15 62.08
Solyc04g078230.1.1 Tomato cytosol, extracellular, plastid 17.92 60.12
KRH47958 Soybean cytosol, nucleus, plasma membrane 60.15 59.07
KRH06520 Soybean cytosol, nucleus, plasma membrane 60.33 59.03
Solyc04g078240.1.1 Tomato cytosol 15.54 52.8
TraesCS7A01G327300.1 Wheat plasma membrane 34.0 35.43
TraesCS7A01G464300.2 Wheat plasma membrane 35.1 35.04
TraesCS4A01G004400.1 Wheat plasma membrane 34.0 34.44
TraesCS3A01G195100.1 Wheat cytosol, peroxisome, plasma membrane 28.7 28.91
TraesCS5A01G547500.1 Wheat plasma membrane 15.36 17.25
TraesCS5A01G161200.4 Wheat plasma membrane 16.82 7.43
TraesCS4A01G275600.1 Wheat plasma membrane 16.09 7.33
Protein Annotations
EnsemblPlants:TraesCS5A01G072200.1EnsemblPlantsGene:TraesCS5A01G072200GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0030001GO:GO:0046873HAMAP:MF_00221InterPro:NRAMP_fam
PANTHER:PTHR11706PANTHER:PTHR11706:SF46PFAM:PF01566PRINTS:PR00447SEG:segTIGRFAMs:TIGR01197
TMHMM:TMhelixMapMan:24.2.3.10::::
Description
No Description!
Coordinates
chr5A:+:82982111..82985798
Molecular Weight (calculated)
59129.3 Da
IEP (calculated)
4.976
GRAVY (calculated)
0.455
Length
547 amino acids
Sequence
(BLAST)
001: MSAHAVPGAA GDAGAARADD EARALLPASA PGSDHGDAGS SSGGEEEEDL EERAFEASEK VLVSISDDPD ADTDLEAQLA SSSGSPPFSW RKLWLFTGPG
101: FLMSIAFLDP GNLEGDLQAG AAAGDTLLWL LMWATAMGLL VQLLAARLGV ATGRHLAELC RDEYPDWARR ALWLMAEVAM VGADIQEVIG SAIAIKILSN
201: GYLPLWAGVV ITALDCFIFL SLENYGVRKL EAVFAVLIAT MAVSFAWMFT DTKPNGKDLL IGILVPKLSS KTIRQAVGVV GCVIMPHNVF LHSALVQSRK
301: IDPKKEYQVR EALRYYSIES TVALAISFMI NLFVTTVFAK GFYGSKEAGS IGLENAGQYL QEKFGGGFLP ILYIWGIGLL AAGQSSTITG TYAGQFIMGG
401: FLNLRLKKWL RALITRSFAI VPTIIVALFF DSSDALDVLN EWLNVLQSIQ IPFALIPLIT LVSKEQVMGV FRIGRKMQAV TWTVAALLIT INGYLLLDFF
501: SSEIRGPLYG SILCMAVLAY ASFVLYLILR GTEISNQMIV AIRKRLS
Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.