Factsheet for Os03t0607400-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 3
vacuole 1
cytosol 1
peroxisome 2
plasma membrane 2
golgi 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	28.24	49.59
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	30.56	30.28
EES17269	Sorghum	cytosol, peroxisome, plasma membrane	71.3	28.31
TraesCS5D01G084900.1	Wheat	plasma membrane	71.3	28.15
TraesCS5B01G078700.1	Wheat	cytosol, plasma membrane, vacuole	71.3	28.15
HORVU5Hr1G018850.2	Barley	cytosol, nucleus, plasma membrane	71.3	28.15
TraesCS5A01G072200.1	Wheat	cytosol, plasma membrane, vacuole	70.83	27.97
Zm00001d030846_P001	Maize	plasma membrane	69.91	26.68
Os12t0581600-01	Rice	cytosol, nucleus, plasma membrane	66.67	26.62
Os03t0208500-01	Rice	plasma membrane	56.02	23.09
CDY47594	Canola	cytosol, nucleus, plasma membrane	55.56	22.77
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	55.56	22.77
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.02	22.74
KRH52059	Soybean	cytosol, nucleus, plasma membrane	54.63	22.61
KRH61379	Soybean	cytosol, peroxisome, plasma membrane	54.17	22.59
CDY17036	Canola	cytosol, nucleus, plasma membrane	55.09	22.58
CDY17090	Canola	cytosol, peroxisome, plasma membrane	55.56	22.51
AT1G47240.1	Thale cress	plasma membrane	55.09	22.45
Solyc04g078250.2.1	Tomato	cytosol, nucleus, plasma membrane	53.7	22.35
VIT_18s0001g09490.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.63	22.01
PGSC0003DMT400055473	Potato	cytosol, peroxisome, plasma membrane	54.17	21.67
CDY64917	Canola	cytosol, plasma membrane, plastid	52.31	21.28
AT4G18790.1	Thale cress	plasma membrane	51.85	21.13
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	51.85	21.05
PGSC0003DMT400059923	Potato	cytosol, peroxisome, plasma membrane	50.46	21.04
CDY62556	Canola	plasma membrane	51.39	20.86
KRH47958	Soybean	cytosol, nucleus, plasma membrane	51.39	19.93
KRH06520	Soybean	cytosol, nucleus, plasma membrane	50.93	19.68
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	35.19	16.31
GSMUA_Achr9P26850_001	Banana	plasma membrane	30.56	15.57
Os06t0676000-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	34.72	13.64
Os07t0257200-01	Rice	cytosol, peroxisome, plasma membrane	31.48	12.64
Os07t0258400-01	Rice	plasma membrane	28.7	11.97
Os01t0503400-03	Rice	plasma membrane	28.7	11.27
Solyc04g078240.1.1	Tomato	cytosol	7.87	10.56
CDY06751	Canola	plasma membrane	14.81	7.64
Os07t0155600-01	Rice	cytosol, peroxisome, plasma membrane	17.59	2.97
Os03t0700800-01	Rice	plasma membrane	16.2	2.69
Os07t0156732-01	Rice	nucleus	0.0	0.0
Os07t0157401-01	Rice	nucleus	0.0	0.0
Solyc04g078230.1.1	Tomato	cytosol, extracellular, plastid	0.0	0.0

Protein Annotations

MapMan:35.1	ProteinID:AAR87218.1	ProteinID:BAF12552.1	ProteinID:BAS85233.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	InterPro:NRAMP_fam	EnsemblPlantsGene:Os03g0607400	EnsemblPlants:Os03t0607400-01	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF51	UniProt:Q75I51	TMHMM:TMhelix	UniParc:UPI000022DFA2	SEG:seg

Description

Similar to Metal transporter Nramp6. (Os03t0607400-01)

Coordinates

chr3:-:22822747..22826585

Molecular Weight (calculated)

23058.5 Da

IEP (calculated)

4.149

GRAVY (calculated)

0.291

Length

216 amino acids

Sequence
(BLAST)

001: MAAAAAAAAD ADAAGERAAG AGLGSRSAAE ERSLLHPSLF SAYSDEDLVE RAFEPAQKIV VSISSDPDDP DADDEHLYYG GHAPPFSWRK LWLFTGPGFL
101: MSIAFLDPGN LEGDLQAGAT AGDTLLWLLF WATAMGLLVQ LLAARLGVAT GKHLAELCRD EYPDWARRAL WLMAEVSMVS ADIQEVIGSA IAIKILSNGF
201: LPIWVGVVIT ALDWLM

Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)

001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS

Arabidopsis Description

NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.