Factsheet for Os07t0257200-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88782	Sorghum	cytosol, peroxisome, plasma membrane	85.87	86.36
Zm00001d019327_P001	Maize	cytosol, peroxisome, plasma membrane	80.67	83.3
TraesCS4B01G300600.1	Wheat	plasma membrane	83.46	83.15
TraesCS4D01G299400.1	Wheat	plasma membrane	83.09	83.09
TraesCS4A01G004400.1	Wheat	plasma membrane	83.27	82.96
HORVU4Hr1G077510.1	Barley	plasma membrane	83.46	82.84
GSMUA_Achr5P25950_001	Banana	cytosol, nucleus, plasma membrane	62.45	77.6
Os07t0258400-01	Rice	plasma membrane	70.82	73.55
Solyc11g018530.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.26	71.32
VIT_18s0001g02120.t01	Wine grape	plasma membrane	71.38	70.85
PGSC0003DMT400023921	Potato	cytosol, peroxisome, plasma membrane	69.7	70.75
GSMUA_Achr11P...	Banana	cytosol	68.03	70.38
KRH53274	Soybean	plastid	69.52	68.75
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	70.26	68.23
VIT_18s0001g02140.t01	Wine grape	plasma membrane	60.78	66.19
VIT_00s0218g00100.t01	Wine grape	endoplasmic reticulum, plasma membrane	55.76	58.82
Os06t0676000-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	57.43	56.18
Os01t0503400-03	Rice	plasma membrane	52.6	51.45
VIT_18s0001g02130.t01	Wine grape	plastid	17.84	47.29
Os03t0208500-01	Rice	plasma membrane	34.39	35.31
Os12t0581600-01	Rice	cytosol, nucleus, plasma membrane	34.39	34.2
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	13.38	33.03
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	7.25	31.71
Os03t0607400-01	Rice	cytosol, peroxisome, plasma membrane, plastid	12.64	31.48
Os07t0155600-01	Rice	cytosol, peroxisome, plasma membrane	22.86	9.6
Os03t0700800-01	Rice	plasma membrane	21.75	9.01
Os07t0157401-01	Rice	nucleus	2.6	2.32
Os07t0156732-01	Rice	nucleus	2.6	2.32

Protein Annotations

MapMan:24.2.3.10	EntrezGene:4342859	EMBL:AB690551	EMBL:AB698459	EMBL:AK070788	ProteinID:BAC21413.1
ProteinID:BAF21226.1	ProteinID:BAT00873.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055072	UniProt:I7GYG6	HAMAP:MF_00221	InterPro:NRAMP_fam	EnsemblPlantsGene:Os07g0257200	EnsemblPlants:Os07t0257200-01
PFAM:PF01566	PRINTS:PR00447	PANTHER:PTHR11706	PANTHER:PTHR11706:SF38	UniProt:Q8H4H5	TIGRFAMs:TIGR01197
TMHMM:TMhelix	UniParc:UPI00000AD6D2	RefSeq:XP_015645014.1	SEG:seg	:	:

Description

NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 5Manganese and Cadmium transporter, Mn and Cd uptake (Os07t0257200-01)

Coordinates

chr7:-:8871643..8878905

Molecular Weight (calculated)

58501.3 Da

IEP (calculated)

7.264

GRAVY (calculated)

0.588

Length

538 amino acids

Sequence
(BLAST)

001: MEIERESSER GSISWRASAA HDQDAKKLDA DDQLLMKEPA WKRFLAHVGP GFMVSLAYLD PGNLETDLQA GANHRYELLW VILIGLIFAL IIQSLAANLG
101: VVTGRHLAEI CKSEYPKFVK IFLWLLAELA VIAADIPEVI GTAFAFNILF HIPVWVGVLI TGTSTLLLLG LQKYGVRKLE FLISMLVFVM AACFFGELSI
201: VKPPAKEVMK GLFIPRLNGD GATADAIALL GALVMPHNLF LHSALVLSRK TPASVRGIKD GCRFFLYESG FALFVALLIN IAVVSVSGTA CSSANLSQED
301: ADKCANLSLD TSSFLLKNVL GKSSAIVYGV ALLASGQSST ITGTYAGQYI MQGFLDIRMR KWLRNLMTRT IAIAPSLIVS IIGGSRGAGR LIIIASMILS
401: FELPFALIPL LKFSSSKSKM GPHKNSIYII VFSWFLGLLI IGINMYFLST SFVGWLIHND LPKYANVLVG AAVFPFMLVY IVAVVYLTIR KDSVVTFVAD
501: SSLAAVVDAE KADAGDLAVD DDEPLPYRDD LADIPLPR

Best Arabidopsis Sequence Match ( AT1G15960.1 )
(BLAST)

001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN

Arabidopsis Description

NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.