Factsheet for HORVU4Hr1G077510.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G300600.1	Wheat	plasma membrane	97.6	97.96
TraesCS4A01G004400.1	Wheat	plasma membrane	97.42	97.78
TraesCS4D01G299400.1	Wheat	plasma membrane	97.05	97.77
OQU88782	Sorghum	cytosol, peroxisome, plasma membrane	85.98	87.1
Zm00001d019327_P001	Maize	cytosol, peroxisome, plasma membrane	81.18	84.45
Os07t0257200-01	Rice	cytosol, peroxisome, plasma membrane	82.84	83.46
GSMUA_Achr5P25950_001	Banana	cytosol, nucleus, plasma membrane	61.81	77.37
HORVU7Hr1G078330.2	Barley	peroxisome, plasma membrane	71.96	75.73
Solyc11g018530.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.48	72.08
PGSC0003DMT400023921	Potato	cytosol, peroxisome, plasma membrane	70.3	71.89
KRH53274	Soybean	plastid	70.85	70.59
GSMUA_Achr11P...	Banana	cytosol	66.79	69.62
VIT_18s0001g02120.t01	Wine grape	plasma membrane	69.56	69.56
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	70.11	68.59
VIT_18s0001g02140.t01	Wine grape	plasma membrane	60.7	66.6
VIT_00s0218g00100.t01	Wine grape	endoplasmic reticulum, plasma membrane	56.09	59.61
HORVU7Hr1G106570.1	Barley	plasma membrane	56.83	56.2
VIT_18s0001g02130.t01	Wine grape	plastid	18.63	49.75
HORVU3Hr1G042440.4	Barley	mitochondrion, plasma membrane	50.37	45.05
HORVU4Hr1G069320.1	Barley	vacuole	33.58	34.87
HORVU5Hr1G018850.2	Barley	cytosol, nucleus, plasma membrane	34.32	34.0
HORVU4Hr1G013220.1	Barley	mitochondrion, peroxisome, plasma membrane	33.95	33.52
HORVU5Hr1G050310.2	Barley	plasma membrane	11.07	24.19
HORVU4Hr1G090460.5	Barley	plasma membrane	11.99	15.85
HORVU5Hr1G050330.5	Barley	plasma membrane	10.52	5.64

Protein Annotations

EnsemblPlants:HORVU4Hr1G077510.1	EnsemblPlantsGene:HORVU4Hr1G077510	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	HAMAP:MF_00221
InterPro:NRAMP_fam	PANTHER:PTHR11706	PANTHER:PTHR11706:SF38	PFAM:PF01566	PRINTS:PR00447	SEG:seg
TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0002955181	UniProt:M0X4N6	MapMan:24.2.3.10	:

Description

No Description!

Coordinates

chrchr4H:-:604747329..604752319

Molecular Weight (calculated)

58616.4 Da

IEP (calculated)

7.412

GRAVY (calculated)

0.545

Length

542 amino acids

Sequence
(BLAST)

001: MEIEREAPGS ERGRSWRANP AAAQDAQGEK KFGDGDETFV KEPAWKRFLS HVGPGFMVSL AYLDPGNLET DLQAGANHRY ELLWVILIGL IFALIIQSLA
101: ANLGVVTGKH LAEICKSEYP KPVMICLWLL AEVAVIAADI PEVIGTAFAF YLLFRIPVWI GVLITGSSTL LLLGLQRYGV RKLEFLISML VFVMAACFFG
201: ELSIVKPPAK EVLKGLFIPK LKGNGATADA IALLGALVMP HNLFLHSALV LSRKTPSSVR GIKDACRFFL YESGFALFVA LLINIAVVSV SGTVCFGENL
301: SAEDIDKCSD LSLDNSSFLL KNVLGRSSSI VYGVALLASG QSSTITGTYA GQYIMQGFLD IKMKTWLRNL MTRCIAIAPS LVVSIIGGSN GAGRLIIIAS
401: MILSFELPFA LIPLLKFSSS SSKMGPHKNS IYIIVFSWTL GLMLIGINVY FLSTSFMGWL INSSLPTYAK VLVGVVVCPL MLVYLVAVVY LTFRKDTVVT
501: FVADSCKADA EKAAGGSGED DDEPVPYRED LADIPLPAHS RG

Best Arabidopsis Sequence Match ( AT1G15960.1 )
(BLAST)

001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN

Arabidopsis Description

NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.