Factsheet for Os12t0581600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17269	Sorghum	cytosol, peroxisome, plasma membrane	86.32	85.85
TraesCS5A01G072200.1	Wheat	cytosol, plasma membrane, vacuole	85.4	84.46
TraesCS5B01G078700.1	Wheat	cytosol, plasma membrane, vacuole	85.4	84.46
HORVU5Hr1G018850.2	Barley	cytosol, nucleus, plasma membrane	85.4	84.46
TraesCS5D01G084900.1	Wheat	plasma membrane	85.21	84.28
Zm00001d030846_P001	Maize	plasma membrane	86.14	82.33
GSMUA_Achr9P26850_001	Banana	plasma membrane	58.78	75.0
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	62.85	72.96
KRH61379	Soybean	cytosol, peroxisome, plasma membrane	67.84	70.85
KRH52059	Soybean	cytosol, nucleus, plasma membrane	67.65	70.11
VIT_18s0001g09490.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.76	69.4
AT1G47240.1	Thale cress	plasma membrane	67.28	68.68
CDY17036	Canola	cytosol, nucleus, plasma membrane	66.54	68.31
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	66.54	68.31
CDY47594	Canola	cytosol, nucleus, plasma membrane	66.36	68.12
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.73	67.86
PGSC0003DMT400055473	Potato	cytosol, peroxisome, plasma membrane	67.47	67.59
CDY17090	Canola	cytosol, peroxisome, plasma membrane	66.54	67.54
Os03t0208500-01	Rice	plasma membrane	64.69	66.79
Os03t0607400-01	Rice	cytosol, peroxisome, plasma membrane, plastid	26.62	66.67
PGSC0003DMT400059923	Potato	cytosol, peroxisome, plasma membrane	63.22	66.02
Solyc04g078250.2.1	Tomato	cytosol, nucleus, plasma membrane	63.22	65.9
CDY06751	Canola	plasma membrane	50.28	64.92
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	62.29	63.35
CDY64917	Canola	cytosol, plasma membrane, plastid	62.11	63.28
CDY62556	Canola	plasma membrane	62.11	63.16
AT4G18790.1	Thale cress	plasma membrane	60.81	62.08
Solyc04g078230.1.1	Tomato	cytosol, extracellular, plastid	18.48	61.35
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	24.21	60.09
KRH47958	Soybean	cytosol, nucleus, plasma membrane	59.52	57.81
KRH06520	Soybean	cytosol, nucleus, plasma membrane	59.33	57.42
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	12.01	52.85
Solyc04g078240.1.1	Tomato	cytosol	15.34	51.55
Os06t0676000-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	35.12	34.55
Os07t0257200-01	Rice	cytosol, peroxisome, plasma membrane	34.2	34.39
Os07t0258400-01	Rice	plasma membrane	32.9	34.36
Os01t0503400-03	Rice	plasma membrane	27.73	27.27
Os07t0155600-01	Rice	cytosol, peroxisome, plasma membrane	17.74	7.49
Os03t0700800-01	Rice	plasma membrane	16.27	6.77
Os07t0156732-01	Rice	nucleus	1.11	1.0
Os07t0157401-01	Rice	nucleus	1.11	1.0

Protein Annotations

MapMan:24.2.3.10	EntrezGene:4352640	ProteinID:ABA99133.1	EMBL:AK071485	ProteinID:BAF30154.1	ProteinID:BAT17821.1
ProteinID:EAZ21011.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055072
HAMAP:MF_00221	InterPro:NRAMP_fam	EnsemblPlantsGene:Os12g0581600	EnsemblPlants:Os12t0581600-01	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	UniProt:Q2QN30	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0000680D59
RefSeq:XP_015618209.1	SEG:seg	:	:	:	:

Description

NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 7Similar to Integral membrane protein. (Os12t0581600-01)

Coordinates

chr12:-:24119866..24123724

Molecular Weight (calculated)

58935.0 Da

IEP (calculated)

4.962

GRAVY (calculated)

0.466

Length

541 amino acids

Sequence
(BLAST)

001: MAPLPAAATA TASSAATPAD DEAHSLLPST PSNEEDDDDL EERAYEATEK VIVSISDFPD ADDDEEESGL ATSTAASGIP PFSWRKLWLF TGPGFLMSIA
101: FLDPGNLEGD LQAGAVAGDT LLWLLLWATS MGLLVQLLAA RVGVATGRHL AELCRDEYPS WARRALWLMA EVAMVGADIQ EVIGSAIAIK ILSRGFLPLW
201: AGVVITALDC FIFLSLENYG VRKLEAVFAI LIATMAVSFA WMFTDTKPNM KNLFIGILVP KLSSRTIRQA VGVVGCVIMP HNVFLHSALV QSRKIDPNKE
301: HQVREALRYY SIESTIALAV SFMINLFVTT VFAKGFYGTK EAGNIGLENA GQYLQEKFGG GFFPILYIWG IGLLAAGQSS TITGTYAGQF IMGGFLNLKL
401: KKWIRSLITR SFAIVPTIIV ALFFDKSDSL DVLNEWLNVL QSIQIPFALI PLITLVSKEK VMGVFKIGRN TQAVTWTVAT LLITINGYLL LDFFSSEIRG
501: LLSGSILCVA VLAYASFVLY LILRGTELPN QIITTIRKSF S

Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)

001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS

Arabidopsis Description

NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.