Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52059 | Soybean | cytosol, nucleus, plasma membrane | 96.33 | 95.59 |
| AT1G47240.1 | Thale cress | plasma membrane | 78.19 | 76.42 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 77.61 | 76.28 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 77.41 | 76.09 |
| Bra040791.1-P | Field mustard | cytosol, nucleus, plasma membrane | 77.22 | 75.9 |
| KRH28413 | Soybean | plasma membrane | 72.97 | 74.7 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 76.83 | 74.67 |
| Bra040711.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 76.64 | 74.62 |
| KRH77065 | Soybean | plasma membrane | 72.97 | 74.56 |
| PGSC0003DMT400055473 | Potato | cytosol, peroxisome, plasma membrane | 77.03 | 73.89 |
| KRH04493 | Soybean | peroxisome | 72.97 | 73.26 |
| KRH58028 | Soybean | plasma membrane | 72.78 | 73.06 |
| GSMUA_Achr9P26850_001 | Banana | plasma membrane | 58.49 | 71.46 |
| CDY06751 | Canola | plasma membrane | 57.53 | 71.12 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 69.69 | 69.56 |
| PGSC0003DMT400059923 | Potato | cytosol, peroxisome, plasma membrane | 69.5 | 69.5 |
| TraesCS5D01G084900.1 | Wheat | plasma membrane | 72.78 | 68.92 |
| TraesCS5A01G072200.1 | Wheat | cytosol, plasma membrane, vacuole | 72.39 | 68.56 |
| TraesCS5B01G078700.1 | Wheat | cytosol, plasma membrane, vacuole | 72.39 | 68.56 |
| HORVU5Hr1G018850.2 | Barley | cytosol, nucleus, plasma membrane | 72.01 | 68.19 |
| EES17269 | Sorghum | cytosol, peroxisome, plasma membrane | 71.43 | 68.01 |
| Os12t0581600-01 | Rice | cytosol, nucleus, plasma membrane | 70.85 | 67.84 |
| GSMUA_Achr4P32750_001 | Banana | peroxisome, plasma membrane, vacuole | 60.42 | 67.17 |
| GSMUA_Achr6P07820_001 | Banana | cytosol, plasma membrane, vacuole | 56.95 | 66.59 |
| KRH06520 | Soybean | cytosol, nucleus, plasma membrane | 70.85 | 65.65 |
| KRH47958 | Soybean | cytosol, nucleus, plasma membrane | 70.27 | 65.35 |
| EER92665 | Sorghum | cytosol, peroxisome, plasma membrane | 64.86 | 65.12 |
| Zm00001d030846_P001 | Maize | plasma membrane | 70.85 | 64.84 |
| TraesCS4B01G078000.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.41 | 64.78 |
| Zm00001d048129_P004 | Maize | cytosol, peroxisome, plasma membrane | 64.48 | 64.73 |
| TraesCS4D01G076500.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.22 | 64.72 |
| TraesCS4A01G237200.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.22 | 64.6 |
| GSMUA_Achr3P18820_001 | Banana | cytosol, peroxisome, plasma membrane | 58.69 | 63.87 |
| HORVU4Hr1G069320.1 | Barley | vacuole | 63.71 | 63.22 |
| TraesCS4D01G254100.1 | Wheat | cytosol, plasma membrane, vacuole | 63.13 | 63.01 |
| Os03t0208500-01 | Rice | plasma membrane | 63.51 | 62.79 |
| TraesCS4B01G254300.1 | Wheat | cytosol, plasma membrane, vacuole | 63.13 | 62.76 |
| TraesCS4A01G050500.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.93 | 62.57 |
| HORVU4Hr1G013220.1 | Barley | mitochondrion, peroxisome, plasma membrane | 66.02 | 62.3 |
| KXG38042 | Sorghum | cytosol, nucleus, plasma membrane | 65.64 | 62.27 |
| Zm00001d033367_P001 | Maize | cytosol, nucleus, plasma membrane | 64.67 | 62.04 |
| Os03t0607400-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 22.59 | 54.17 |
| Os03t0606600-00 | Rice | extracellular, mitochondrion, peroxisome | 22.59 | 53.67 |
| Os01t0733001-00 | Rice | endoplasmic reticulum, nucleus | 11.78 | 49.59 |
| KRH09654 | Soybean | plastid | 37.26 | 35.35 |
| KRH47347 | Soybean | plasma membrane | 37.07 | 35.23 |
| KRH53274 | Soybean | plastid | 36.87 | 35.11 |
| KRH23641 | Soybean | plastid | 36.68 | 34.93 |
| KRH44555 | Soybean | mitochondrion | 37.26 | 32.82 |
| KRH67695 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 21.04 | 8.47 |
| KRH32544 | Soybean | plasma membrane | 20.85 | 8.32 |
| KRH19943 | Soybean | plasma membrane | 20.85 | 8.23 |
Protein Annotations
| EntrezGene:100791117 | MapMan:24.2.3.10 | EMBL:ACUP02002162 | ncoils:Coil | EnsemblPlantsGene:GLYMA_04G044000 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0030001 | GO:GO:0046873 | UniProt:I1JTP4 | EnsemblPlants:KRH61379 | ProteinID:KRH61379 | ProteinID:KRH61379.1 |
| HAMAP:MF_00221 | InterPro:NRAMP_fam | PFAM:PF01566 | PRINTS:PR00447 | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF46 |
| TIGRFAMs:TIGR01197 | TMHMM:TMhelix | UniParc:UPI000233939E | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:3519742..3523911
Molecular Weight (calculated)
56738.7 Da
IEP (calculated)
4.932
GRAVY (calculated)
0.554
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAPSREEES EANRLLEEAA SSWEEEVAYE AGEKILVADL EFDRVDDGSA PPPFSWKKLW LFTGPGFLMS IAFLDPGNLE GDLQAGAIAG YSLLWLLMWA
101: TFMGLLIQLL SARVGVATGR HLAELCRDEY PNWARLVLWF MAELALIGAD IQEVIGSAIA IQILSRGFFP LWAGVLITAS DCFFFLFLEN YGVRKLEAAF
201: AVLIAVMGLS FAWMFGDAQP NREELLMGIL VPRLGSKTIR QAVGVVGCVI MPHNVFLHSA LVQSRKVDPK KIGRVQEALN YYSIESSAAL AVSFMINLFV
301: TTVFAKGFYG TKQADSIGLV NAGQYLEEKY GGGVFPILYI WGIGLLAAGQ SSTITGTYAG QFIMGGFLNL RLKKWLRALI TRSFAIVPTI IVAIVFNRSE
401: GSLDVLNEWL NVLQSMQIPF ALIPLLTLVS KEQIMGTFRV GPVLERVAWT VAGLIIIING YLLLDFFVSE VNGILLGLLA CSCTTAYIAF IVYLVSQSGI
501: LPSAWVNRLP KGFSSCGN
101: TFMGLLIQLL SARVGVATGR HLAELCRDEY PNWARLVLWF MAELALIGAD IQEVIGSAIA IQILSRGFFP LWAGVLITAS DCFFFLFLEN YGVRKLEAAF
201: AVLIAVMGLS FAWMFGDAQP NREELLMGIL VPRLGSKTIR QAVGVVGCVI MPHNVFLHSA LVQSRKVDPK KIGRVQEALN YYSIESSAAL AVSFMINLFV
301: TTVFAKGFYG TKQADSIGLV NAGQYLEEKY GGGVFPILYI WGIGLLAAGQ SSTITGTYAG QFIMGGFLNL RLKKWLRALI TRSFAIVPTI IVAIVFNRSE
401: GSLDVLNEWL NVLQSMQIPF ALIPLLTLVS KEQIMGTFRV GPVLERVAWT VAGLIIIING YLLLDFFVSE VNGILLGLLA CSCTTAYIAF IVYLVSQSGI
501: LPSAWVNRLP KGFSSCGN
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.