Factsheet for Bra040791.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17036	Canola	cytosol, nucleus, plasma membrane	99.43	99.43
CDY47594	Canola	cytosol, nucleus, plasma membrane	98.67	98.67
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	96.77	95.86
AT1G47240.1	Thale cress	plasma membrane	93.74	93.21
KRH61379	Soybean	cytosol, peroxisome, plasma membrane	75.9	77.22
KRH52059	Soybean	cytosol, nucleus, plasma membrane	76.28	77.01
GSMUA_Achr9P26850_001	Banana	plasma membrane	59.01	73.35
PGSC0003DMT400055473	Potato	cytosol, peroxisome, plasma membrane	73.43	71.67
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	68.5	70.65
PGSC0003DMT400059923	Potato	cytosol, peroxisome, plasma membrane	68.5	69.69
Bra012154.1-P	Field mustard	peroxisome	67.36	69.34
Solyc04g078250.2.1	Tomato	cytosol, nucleus, plasma membrane	66.98	68.02
TraesCS5D01G084900.1	Wheat	plasma membrane	70.02	67.46
TraesCS5B01G078700.1	Wheat	cytosol, plasma membrane, vacuole	69.83	67.28
TraesCS5A01G072200.1	Wheat	cytosol, plasma membrane, vacuole	69.64	67.09
HORVU5Hr1G018850.2	Barley	cytosol, nucleus, plasma membrane	69.64	67.09
EES17269	Sorghum	cytosol, peroxisome, plasma membrane	69.07	66.91
Os12t0581600-01	Rice	cytosol, nucleus, plasma membrane	68.31	66.54
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	67.17	66.54
GSMUA_Achr6P07820_001	Banana	cytosol, plasma membrane, vacuole	55.79	66.37
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	58.44	66.09
EER92665	Sorghum	cytosol, peroxisome, plasma membrane	64.33	65.7
HORVU4Hr1G069320.1	Barley	vacuole	64.71	65.33
Zm00001d048129_P004	Maize	cytosol, peroxisome, plasma membrane	63.95	65.31
TraesCS4D01G076500.1	Wheat	cytosol, peroxisome, plasma membrane	65.65	65.28
TraesCS4A01G237200.1	Wheat	cytosol, peroxisome, plasma membrane	65.65	65.16
TraesCS4D01G254100.1	Wheat	cytosol, plasma membrane, vacuole	64.14	65.13
TraesCS4B01G078000.1	Wheat	cytosol, peroxisome, plasma membrane	65.46	64.97
TraesCS4B01G254300.1	Wheat	cytosol, plasma membrane, vacuole	64.14	64.88
TraesCS4A01G050500.1	Wheat	cytosol, peroxisome, plasma membrane	63.76	64.49
Os03t0208500-01	Rice	plasma membrane	63.57	63.93
Zm00001d030846_P001	Maize	plasma membrane	68.31	63.6
GSMUA_Achr3P18820_001	Banana	cytosol, peroxisome, plasma membrane	57.12	63.24
HORVU4Hr1G013220.1	Barley	mitochondrion, peroxisome, plasma membrane	65.46	62.84
Zm00001d033367_P001	Maize	cytosol, nucleus, plasma membrane	63.95	62.41
KXG38042	Sorghum	cytosol, nucleus, plasma membrane	63.95	61.72
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	23.15	55.96
Os03t0607400-01	Rice	cytosol, peroxisome, plasma membrane, plastid	22.77	55.56
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	11.2	47.97
Bra026089.1-P	Field mustard	plasma membrane	32.26	36.32
Bra035149.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.91	35.45
Bra008437.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	35.1	34.77
Bra003587.1-P	Field mustard	cytosol, plastid, vacuole	34.35	34.35
Bra033988.1-P	Field mustard	plasma membrane	31.69	30.76
Bra039185.1-P	Field mustard	cytosol	69.07	28.0
Bra009539.1-P	Field mustard	plasma membrane	19.73	7.93

Protein Annotations

MapMan:24.2.3.10	EnsemblPlantsGene:Bra040791	EnsemblPlants:Bra040791.1	EnsemblPlants:Bra040791.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	UniProt:M4FI62	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI000253E8EE	SEG:seg

Description

AT1G47240 (E=2e-254) NRAMP2, ATNRAMP2 | NRAMP2; inorganic anion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrScaffold000259:+:12777..14666

Molecular Weight (calculated)

57979.1 Da

IEP (calculated)

4.943

GRAVY (calculated)

0.500

Length

527 amino acids

Sequence
(BLAST)

001: MENDVKVDEK VEEADRLLPP HSLPSNSDED ESEAAFESRD KIVIVDFESA DDPSAAAPPF SWRKLWLFTG PGFLMSIAFL DPGNLEGDLQ AGAIAGYSLL
101: WLLMWATAMG LLIQMLSARV GVATGRHLAE LCRDEYPTWA RYVLWSMAEI ALIGADIQEV IGSAIAIQIL SRGVLPLWAG VVITASDCFL FLFLENYGVR
201: KLEAMFAVLI ATMGLSFAWM FGETKPSGKE LMIGILLPRL SSKTIRQAVG VVGCVIMPHN VFLHSALVQS RQIDPKRKSR VQEALNYYLI ESSVALFISF
301: LINLFVTTVF AKGFYGTEKA NNIGLVNAGQ YLQEKFGGGL LPILYIWGIG LLAAGQSSTI TGTYAGQFIM GGFLNLRLKK WMRAVITRSC AIVPTMIVAI
401: VFNTSEASLD VLNEWLNVLQ SVQIPFALLP LLTLVSKEEV MGDFKIGPVL QRIAWTVAAL VMIINGYLLL DFFVSEVNGF MFGVTVCVWT SAYVAFIVYL
501: ISHSNFFPSP WSSSSIELPK RVTVSDS

Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)

001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS

Arabidopsis Description

NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.