Factsheet for Bra035149.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87346	Canola	cytosol, peroxisome, plasma membrane	100.0	100.0
CDY39940	Canola	cytosol, peroxisome, plasma membrane	99.23	99.23
Bra008437.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	91.91	89.66
Bra003587.1-P	Field mustard	cytosol, plastid, vacuole	89.21	87.86
AT1G80830.1	Thale cress	plastid	88.25	86.09
Bra026089.1-P	Field mustard	plasma membrane	76.69	85.04
VIT_09s0070g00210.t01	Wine grape	plastid	77.07	73.94
KRH23641	Soybean	plastid	77.26	73.71
KRH09654	Soybean	plastid	76.88	73.08
KRH47347	Soybean	plasma membrane	76.69	73.03
Solyc03g116900.2.1	Tomato	cytosol, peroxisome, plasma membrane	72.83	72.41
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	73.6	70.35
TraesCS7A01G464300.2	Wheat	plasma membrane	73.03	69.16
TraesCS7B01G364800.1	Wheat	plasma membrane	73.03	69.16
TraesCS7D01G451900.1	Wheat	plasma membrane	73.03	69.16
HORVU7Hr1G106570.1	Barley	plasma membrane	72.25	68.43
Os06t0676000-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	71.68	67.64
EER90213	Sorghum	plastid	71.68	67.64
Zm00001d014391_P008	Maize	plasma membrane	71.48	67.45
KRH44555	Soybean	mitochondrion	76.11	67.18
Bra033988.1-P	Field mustard	plasma membrane	68.79	65.75
Bra012154.1-P	Field mustard	peroxisome	36.03	36.52
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	35.65	36.2
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	36.03	35.15
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	35.45	34.91
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.07	34.21
Bra039185.1-P	Field mustard	cytosol	35.65	14.23
Bra009539.1-P	Field mustard	plasma membrane	21.39	8.47

Protein Annotations

MapMan:24.2.3.10	EnsemblPlantsGene:Bra035149	EnsemblPlants:Bra035149.1	EnsemblPlants:Bra035149.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046873	UniProt:M4F252	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566	PRINTS:PR00447
PANTHER:PTHR11706	PANTHER:PTHR11706:SF38	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0002541DC9	SEG:seg

Description

AT1G80830 (E=2e-250) NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrA07:+:22372929..22376009

Molecular Weight (calculated)

55933.4 Da

IEP (calculated)

7.723

GRAVY (calculated)

0.690

Length

519 amino acids

Sequence
(BLAST)

001: MAMADASGPQ LISTTGDADS DQIIVPENKS WKNFFAYLGP GFLVSIAYID PGNFETDLQA GAQYKYELLW IILVASCAGL VIQSLAANLG VVTGKHLAEH
101: CRAEYSKVPN FLLWVVAEIA IVACDIPEVI GTAFALNMLF SIPIWIGVLL TGLSTLMLLA LQQYGVRKLE FLVAFLVFTI AICFVIELHY SKPDAGEVLH
201: GLFVPQLKGN GATGLAISLL GAMVMPHNLF LHSALVLSRK IPRSSTGIKE ACRFYLIESG LALMVAFLIN VSVISVSGAV CNASDLTPED RAKCEDLDLN
301: KASFLLRNVV GKWSSKLFAI ALLASGQSST ITGTYAGQYI MQGFLDLRLV PWLRNFLTRC LAIIPSLIVA LIGGSAGAGK LIIIASMILS FELPFALVPL
401: LKFTSCKIKM GSHVNHMAIS ALTWVIGGLI MGINIYYIVS SFTKLLIHSH MKHVLVVFCG ILGFTGIAIY LASIAYLVFR KNGEAGPLLA STNSQTVETL
501: PRQDIVDMQF GKASTSNAD

Best Arabidopsis Sequence Match ( AT1G80830.2 )
(BLAST)

001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD

Arabidopsis Description

NRAMP1Metal transporter Nramp1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.