Factsheet for Bra039185.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76871	Canola	cytosol, peroxisome, plasma membrane	37.77	95.34
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	36.31	92.37
AT2G23150.1	Thale cress	plasma membrane	34.92	89.19
KRH28413	Soybean	plasma membrane	29.92	76.88
KRH77065	Soybean	plasma membrane	29.85	76.53
VIT_07s0129g00620.t01	Wine grape	plasma membrane	30.23	75.58
Bra012154.1-P	Field mustard	peroxisome	29.62	75.2
KRH04493	Soybean	peroxisome	29.38	74.03
KRH58028	Soybean	plasma membrane	29.31	73.84
Solyc02g092800.2.1	Tomato	cytosol, peroxisome, plasma membrane	28.08	71.71
PGSC0003DMT400064287	Potato	cytosol, nucleus, plasma membrane	28.15	71.07
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.0	69.07
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.15	68.8
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	25.85	63.16
Bra026089.1-P	Field mustard	plasma membrane	13.46	37.39
Bra035149.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.23	35.65
Bra008437.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	14.08	34.4
Bra003587.1-P	Field mustard	cytosol, plastid, vacuole	13.85	34.16
Bra033988.1-P	Field mustard	plasma membrane	13.31	31.86
Bra009539.1-P	Field mustard	plasma membrane	8.69	8.62

Protein Annotations

Gene3D:1.25.10.10	MapMan:24.2.3.10	Gene3D:3.30.40.10	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
EnsemblPlantsGene:Bra039185	EnsemblPlants:Bra039185.1	EnsemblPlants:Bra039185.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006464
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0030001	GO:GO:0046873	InterPro:IPR000225
InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	UniProt:M4FDL4	HAMAP:MF_00221	InterPro:NRAMP_fam
PFAM:PF00514	PFAM:PF01566	PFAM:PF04564	PRINTS:PR00447	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0002542EDC	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

AT2G23150 (E=6e-240) NRAMP3, ATNRAMP3 | NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrA09:+:31640093..31645970

Molecular Weight (calculated)

141886.0 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.003

Length

1300 amino acids

Sequence
(BLAST)

0001: MSRLENDRPL LTERIYEELH AEEEEEETAY DEAEKVHIAS DDERDLEHGV GCGGAPPFSW RKLWLFTGPG FLMSIAFLDP GNLEGDLQAG AIAGYSLLWL
0101: LMWATAMGLL VQLLSARLGV ATGRHLAELC REEYPTWAGM VLWVMAELAL IGSDIQEVIG SAIAIQILTN GIFPLWAGVV ITALDCFVFL FLENYGIRKL
0201: EAVFAVLIGT MAVAFAWMFG QAKPSGSELL VGILVPKLSS RTIQKAVGVV GCIIMPHNVF LHSALVQSRE VDKRQKHRVQ EAINYYTIES TIALAVSFMI
0301: NLFVTTVFAK GFYNTDQADS IGLVNAGQYL QDKYGGGVFP ILYIWGIGLL AAGQSSTITG TYAGQFIMGG FLNFKMKKWL RALITRSCAI IPTIIVALVF
0401: DSSEATLDVL NEWLNVLQSM QIPFALIPLL CLVSKEQIMG SFKIGPLYQT VAWLVAALVI MINGYLLLEF FSSEVSGVVY TGFVTVFTAS YGWEEMGTSA
0501: LVDSISSFLN LSSSRHIDLD PFEKYYKRVE ELLIVLKPVA DAASINSHLV SEERIGKSFD DLTQDVDHSI DLFRSWHAFS SKVYFVLQIE SLIPKMRETI
0601: VDTFHFLMSF ESNLPDELSP PSLEKCLEKV KQLSYEEISS VIDGALRDQR DGAGPTPEVL VRIGENTGLR SNQEILIEAV ALERQKEIAE QSENNSEVEF
0701: LDQLIVIVNR MHERLLLIKQ TQTSSVAILA DFFCPLSLEV MTDPVIVSSG QTYEKAFIKR WIDLGLKVCP KTRQTLTHTT LIPNYTVKAL IANWCETNDV
0801: KLPDPNKSTS LNELSPLLSC TDSVPSVSNK SNDWDASTGE AGKPSSSNLH PSPSPSRSAS ALDTSSLHDY EVRSNDSREM KTDAPGRSSV SSTTRGSVEN
0901: GQTSENHHHL RSPSAASSVS NEDSPRAEAN ENSEESPHAT PYSSDASGEI RSGPLAAATT SAAAPPQRDL SDFSPKFMDR RSRGQFWRRP SERLGSRIVS
1001: APSNETRREL IEVENQVKKL VEELKSSSLD VQRQATAEIR LLAKHNMDNR IVIGNSGAIV LLVELLHSTD SATQENAVTA LLNLSINDNN KSLIAQAGAI
1101: EPLIHVLQNG SSEAKENAAA TLFSLSVIEE LKIKIGQSGA IGPLVDLLGN GTPRGKKDAA TALFNLSIHQ ENKGTIVQSG AVRYLIDLMD PAAGMVDKAV
1201: AVLANLATIP EGRNAIGQEG GIGLLVEVVE LGSARGKENA AAALLQLSTN SGRFCNMVLQ EGAVPPLVAL SQSGTPRARE KAQALLSYFR NQRHGNAGRG

Best Arabidopsis Sequence Match ( AT2G23140.4 )
(BLAST)

001: MEVLLRSISS FLNLSSSKHI DLDPFEKYYK RVEELLRVLK PIADVVVTSD FVFDEKLGKA FEELTQDVDQ SIDLFRSWQA FSSKVYFVLQ IESLLPKMRD
101: TIVDTFQFLM SSKNHLPDEL SPASLEQCLE KIKHLSYEEI SSVIDGALRD QRDGVGPSPE ILVKIGENTG LRSNQEILIE AVALERQKEM AEQSENNAEV
201: EFLDQLIVIV NRMHERLLLI KQTQTSSVAI LADFFCPLSL EVMTDPVIVS SGQTYEKAFI KRWIDLGLKV CPKTRQTLTH TTLIPNYTVK ALIANWCETN
301: DVKLPDPNKS TSLNELSPLL SCTDSIPSTG ADVSARKVSN KSHDWDASSS ETGKPSFSSR ATEREGASPS RPASALGASS PGISGNGYGL DARRGSLNDF
401: EDRSNDSREL RTDAPGRSSV SSTTRGSVEN GQTSENHHHR SPSATSTVSN EEFPRADANE NSEESAHATP YSSDASGEIR SGPLAATTSA ATRRDLSDFS
501: PKFMDRRTRG QFWRRPSERL GSRIVSAPSN ETRRDLSEVE TQVKKLVEEL KSSSLDTQRQ ATAELRLLAK HNMDNRIVIG NSGAIVLLVE LLYSTDSATQ
601: ENAVTALLNL SINDNNKKAI ADAGAIEPLI HVLENGSSEA KENSAATLFS LSVIEENKIK IGQSGAIGPL VDLLGNGTPR GKKDAATALF NLSIHQENKA
701: MIVQSGAVRY LIDLMDPAAG MVDKAVAVLA NLATIPEGRN AIGQEGGIPL LVEVVELGSA RGKENAAAAL LQLSTNSGRF CNMVLQEGAV PPLVALSQSG
801: TPRAREKAQA LLSYFRNQRH GNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.