Factsheet for Bra000573.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21478	Canola	plasma membrane	94.52	96.02
AT2G23150.1	Thale cress	plasma membrane	91.19	91.55
CDX83202	Canola	plasma membrane	95.5	90.71
KRH28413	Soybean	plasma membrane	76.32	77.08
KRH77065	Soybean	plasma membrane	75.93	76.53
Bra012154.1-P	Field mustard	peroxisome	75.93	75.78
VIT_07s0129g00620.t01	Wine grape	plasma membrane	76.91	75.58
KRH04493	Soybean	peroxisome	75.34	74.61
KRH58028	Soybean	plasma membrane	75.15	74.42
Solyc02g092800.2.1	Tomato	cytosol, peroxisome, plasma membrane	72.02	72.3
PGSC0003DMT400064287	Potato	cytosol, nucleus, plasma membrane	72.21	71.65
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	70.65	68.5
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.04	68.23
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	65.17	62.59
Bra026089.1-P	Field mustard	plasma membrane	34.25	37.39
Bra039185.1-P	Field mustard	cytosol	92.37	36.31
Bra035149.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.2	35.65
Bra008437.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	36.2	34.77
Bra003587.1-P	Field mustard	cytosol, plastid, vacuole	35.81	34.72
Bra033988.1-P	Field mustard	plasma membrane	33.66	31.68
Bra009539.1-P	Field mustard	plasma membrane	20.74	8.09

Protein Annotations

MapMan:24.2.3.10	EnsemblPlantsGene:Bra000573	EnsemblPlants:Bra000573.1	EnsemblPlants:Bra000573.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005794	GO:GO:0006810	GO:GO:0006828	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009617	GO:GO:0009987
GO:GO:0010043	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0042742	GO:GO:0046873
GO:GO:0055072	GO:GO:2000379	UniProt:M4C8P5	HAMAP:MF_00221	InterPro:NRAMP_fam	PFAM:PF01566
PRINTS:PR00447	PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI000254012B
SEG:seg	:	:	:	:	:

Description

AT2G23150 (E=3e-268) NRAMP3, ATNRAMP3 | NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter

Coordinates

chrA03:+:11841429..11843185

Molecular Weight (calculated)

56464.4 Da

IEP (calculated)

4.930

GRAVY (calculated)

0.525

Length

511 amino acids

Sequence
(BLAST)

001: MSRSENDRPL LINRIDEEEE ERAYDDTEKV HIVRDEDDNE RDLEYGVGCG GAPPFSWRKL WLFTGPGFLM SIAFLDPGNL EGDLQAGAVA GYSLLWLLMW
101: ATAMGLLVQL LSARLGVATG RHLAELCREE YPTWAGMVLW VMAELALIGS DIQEVIGSAI AIKILTNGLL PLWAGVIITA LDCFVFLFLE NYGIRKLEAV
201: FAVLIGTMAV AFAWMFGQAK PSGSELLVGI LVPKLSSRTI QKAVGVVGCI IMPHNVFLHS ALVQSREVNK RQKYRVQEAI NYYTIESTIA LIVSFMINLF
301: VTTVFAKGFY NTDLADSIGL VNAGQYLQDK YGGGLFPILY IWGIGLLAAG QSSTITGTYA GQFIMGGFLN FKMKKWLRAL ITRSCAIIPT IIVALVFDSS
401: EATLDVLNEW LNVLQSIQIP FALIPLLCLV SKEQIMGSFK IGPFYQTIAW LVAALVIMIN GYLLLEFFSS EVSGVIYTGF VTVFTASYGA FIVYLIARGI
501: NFTPWRFKAE S

Best Arabidopsis Sequence Match ( AT2G23150.1 )
(BLAST)

001: MPQLENNEPL LINEEEEEET AYDETEKVHI VRNEEEDDLE HGVGCGGAPP FSWKKLWLFT GPGFLMSIAF LDPGNLEGDL QAGAVAGYSL LWLLMWATAM
101: GLLVQLLSAR LGVATGRHLA ELCRDEYPTW ARMVLWVMAE LALIGSDIQE VIGSAIAIKI LSNGILPLWA GVVITALDCF VFLFLENYGI RKLEAVFAVL
201: IATMGVSFAW MFGQAKPSGS ELLIGILVPK LSSRTIQKAV GVVGCIIMPH NVFLHSALVQ SREVDKRQKY RVQEALNYYT IESTIALFIS FLINLFVTTV
301: FAKGFYNTDL ANSIGLVNAG QYLQEKYGGG VFPILYIWAI GLLAAGQSST ITGTYAGQFI MGGFLNFKMK KWLRALITRS CAIIPTIIVA LVFDSSEATL
401: DVLNEWLNVL QSIQIPFALI PLLCLVSKEQ IMGSFKIGPL YKTIAWLVAA LVIMINGYLL LEFFSNEVSG IVYTGFVTLF TASYGAFILY LIARGITFTP
501: WPFKAESSH

Arabidopsis Description

NRAMP3Metal transporter Nramp3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNV9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.