Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92665 | Sorghum | cytosol, peroxisome, plasma membrane | 90.84 | 92.25 |
| Zm00001d048129_P004 | Maize | cytosol, peroxisome, plasma membrane | 89.89 | 91.28 |
| HORVU4Hr1G069320.1 | Barley | vacuole | 89.89 | 90.23 |
| TraesCS4D01G254100.1 | Wheat | cytosol, plasma membrane, vacuole | 89.31 | 90.17 |
| TraesCS4A01G050500.1 | Wheat | cytosol, peroxisome, plasma membrane | 89.12 | 89.64 |
| TraesCS4B01G254300.1 | Wheat | cytosol, plasma membrane, vacuole | 89.12 | 89.64 |
| GSMUA_Achr6P07820_001 | Banana | cytosol, plasma membrane, vacuole | 60.5 | 71.56 |
| GSMUA_Achr3P18820_001 | Banana | cytosol, peroxisome, plasma membrane | 62.21 | 68.49 |
| VIT_18s0001g09490.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 66.22 | 64.74 |
| Os12t0581600-01 | Rice | cytosol, nucleus, plasma membrane | 66.79 | 64.69 |
| AT1G47240.1 | Thale cress | plasma membrane | 64.5 | 63.77 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 64.12 | 63.76 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 63.93 | 63.57 |
| Bra040791.1-P | Field mustard | cytosol, nucleus, plasma membrane | 63.93 | 63.57 |
| Bra040711.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 64.5 | 63.53 |
| KRH61379 | Soybean | cytosol, peroxisome, plasma membrane | 62.79 | 63.51 |
| KRH52059 | Soybean | cytosol, nucleus, plasma membrane | 62.98 | 63.22 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 64.12 | 63.04 |
| PGSC0003DMT400055473 | Potato | cytosol, peroxisome, plasma membrane | 64.12 | 62.22 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 60.69 | 61.27 |
| CDY06751 | Canola | plasma membrane | 48.85 | 61.1 |
| PGSC0003DMT400059923 | Potato | cytosol, peroxisome, plasma membrane | 60.31 | 61.0 |
| AT4G18790.1 | Thale cress | plasma membrane | 59.16 | 58.49 |
| Bra012577.1-P | Field mustard | cytosol, plasma membrane, plastid | 58.97 | 58.08 |
| CDY62556 | Canola | plasma membrane | 58.97 | 58.08 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 58.78 | 58.0 |
| Os03t0607400-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 23.09 | 56.02 |
| Solyc04g078230.1.1 | Tomato | cytosol, extracellular, plastid | 17.37 | 55.83 |
| KRH47958 | Soybean | cytosol, nucleus, plasma membrane | 58.4 | 54.94 |
| KRH06520 | Soybean | cytosol, nucleus, plasma membrane | 58.59 | 54.92 |
| Os03t0606600-00 | Rice | extracellular, mitochondrion, peroxisome | 22.14 | 53.21 |
| Solyc04g078240.1.1 | Tomato | cytosol | 15.46 | 50.31 |
| Os01t0733001-00 | Rice | endoplasmic reticulum, nucleus | 11.45 | 48.78 |
| Os06t0676000-01 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 36.26 | 34.55 |
| Os07t0257200-01 | Rice | cytosol, peroxisome, plasma membrane | 35.31 | 34.39 |
| Os07t0258400-01 | Rice | plasma membrane | 33.59 | 33.98 |
| Os01t0503400-03 | Rice | plasma membrane | 28.05 | 26.73 |
| Os07t0155600-01 | Rice | cytosol, peroxisome, plasma membrane | 18.13 | 7.42 |
| Os03t0700800-01 | Rice | plasma membrane | 17.94 | 7.24 |
| Os07t0157401-01 | Rice | nucleus | 1.53 | 1.33 |
| Os07t0156732-01 | Rice | nucleus | 1.53 | 1.33 |
Protein Annotations
| MapMan:24.2.3.10 | EntrezGene:4332012 | ProteinID:AAN77306.1 | ProteinID:ABF94567.1 | EMBL:AK065481 | ProteinID:BAF11244.1 |
| ProteinID:BAS82886.1 | ProteinID:BAS82887.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 |
| GO:GO:0055072 | HAMAP:MF_00221 | InterPro:NRAMP_fam | EnsemblPlantsGene:Os03g0208500 | EnsemblPlants:Os03t0208500-01 | PFAM:PF01566 |
| PRINTS:PR00447 | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF51 | UniProt:Q10Q65 | TIGRFAMs:TIGR01197 | TMHMM:TMhelix |
| UniParc:UPI0000DB4C8C | RefSeq:XP_015632573.1 | SEG:seg | : | : | : |
Description
BACTERIOCIDE EFFECT 2Integral membrane protein. (Os03t0208500-01);Integral membrane protein, Metal ion transport (Os03t0208500-02)
Coordinates
chr3:-:5655157..5659147
Molecular Weight (calculated)
56931.1 Da
IEP (calculated)
6.523
GRAVY (calculated)
0.564
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDLAESL LPVGGGAATA TATATAHDEY DERAYDSDDK VSIAVSDSDS EDGGGGGGDA MRPAFSWRKL WRFTGPGFLM CIAFLDPGNL EGDLQAGAAA
101: GYQLLWLLLW ATVMGALVQL LSARLGVATG KHLAELCREE YPPWATRALW AMTELALVGA DIQEVIGSAI AIKILSAGTV PLWGGVVITA FDCFIFLFLE
201: NYGVRKLEAF FGVLIAVMAV SFAIMFGETK PSGKELLIGL VVPKLSSRTI KQAVGIVGCI IMPHNVFLHS ALVQSRKIDT NKKSRVQEAV FYYNIESILA
301: LIVSFFINIC VTTVFAKGFY GSEQADGIGL ENAGQYLQQK YGTAFFPILY IWAIGLLASG QSSTITGTYA GQFVMGGFLN LRLKKWLRAM ITRSFAIIPT
401: MIVALFFDTE DPTMDILNEA LNVLQSIQIP FALIPLITLV SKEQVMGSFV VGPITKVISW IVTVFLMLIN GYLILSFYAT EVRGALVRSS LCVVLAVYLA
501: FIVYLIMRNT SLYSRLRSAM TKST
101: GYQLLWLLLW ATVMGALVQL LSARLGVATG KHLAELCREE YPPWATRALW AMTELALVGA DIQEVIGSAI AIKILSAGTV PLWGGVVITA FDCFIFLFLE
201: NYGVRKLEAF FGVLIAVMAV SFAIMFGETK PSGKELLIGL VVPKLSSRTI KQAVGIVGCI IMPHNVFLHS ALVQSRKIDT NKKSRVQEAV FYYNIESILA
301: LIVSFFINIC VTTVFAKGFY GSEQADGIGL ENAGQYLQQK YGTAFFPILY IWAIGLLASG QSSTITGTYA GQFVMGGFLN LRLKKWLRAM ITRSFAIIPT
401: MIVALFFDTE DPTMDILNEA LNVLQSIQIP FALIPLITLV SKEQVMGSFV VGPITKVISW IVTVFLMLIN GYLILSFYAT EVRGALVRSS LCVVLAVYLA
501: FIVYLIMRNT SLYSRLRSAM TKST
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.