Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 2
- endoplasmic reticulum 2
- mitochondrion 1
- plasma membrane 2
- plastid 1
- extracellular 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0607400-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 49.59 | 28.24 |
| Os12t0581600-01 | Rice | cytosol, nucleus, plasma membrane | 52.85 | 12.01 |
| TraesCS4B01G078000.1 | Wheat | cytosol, peroxisome, plasma membrane | 51.22 | 11.86 |
| TraesCS4A01G237200.1 | Wheat | cytosol, peroxisome, plasma membrane | 51.22 | 11.86 |
| KRH61379 | Soybean | cytosol, peroxisome, plasma membrane | 49.59 | 11.78 |
| TraesCS4D01G076500.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.41 | 11.7 |
| KRH52059 | Soybean | cytosol, nucleus, plasma membrane | 49.59 | 11.69 |
| HORVU4Hr1G013220.1 | Barley | mitochondrion, peroxisome, plasma membrane | 51.22 | 11.48 |
| Os03t0606600-00 | Rice | extracellular, mitochondrion, peroxisome | 20.33 | 11.47 |
| Os03t0208500-01 | Rice | plasma membrane | 48.78 | 11.45 |
| Bra040791.1-P | Field mustard | cytosol, nucleus, plasma membrane | 47.97 | 11.2 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 47.97 | 11.2 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 47.97 | 11.2 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 47.15 | 11.18 |
| AT4G18790.1 | Thale cress | plasma membrane | 47.97 | 11.13 |
| AT1G47240.1 | Thale cress | plasma membrane | 47.97 | 11.13 |
| Bra040711.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 47.97 | 11.09 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 47.97 | 11.07 |
| PGSC0003DMT400059923 | Potato | cytosol, peroxisome, plasma membrane | 46.34 | 11.0 |
| PGSC0003DMT400055473 | Potato | cytosol, peroxisome, plasma membrane | 47.97 | 10.93 |
| VIT_18s0001g09490.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 47.15 | 10.82 |
| KXG38042 | Sorghum | cytosol, nucleus, plasma membrane | 47.97 | 10.81 |
| Zm00001d033367_P001 | Maize | cytosol, nucleus, plasma membrane | 47.15 | 10.74 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 46.34 | 10.73 |
| CDY62556 | Canola | plasma membrane | 46.34 | 10.71 |
| Bra012577.1-P | Field mustard | cytosol, plasma membrane, plastid | 46.34 | 10.71 |
| KRH47958 | Soybean | cytosol, nucleus, plasma membrane | 47.97 | 10.59 |
| KRH06520 | Soybean | cytosol, nucleus, plasma membrane | 47.97 | 10.55 |
| GSMUA_Achr9P26850_001 | Banana | plasma membrane | 32.52 | 9.43 |
| Os06t0676000-01 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 34.15 | 7.64 |
| Os01t0503400-03 | Rice | plasma membrane | 33.33 | 7.45 |
| Os07t0258400-01 | Rice | plasma membrane | 30.89 | 7.34 |
| Os07t0257200-01 | Rice | cytosol, peroxisome, plasma membrane | 31.71 | 7.25 |
| GSMUA_Achr4P32750_001 | Banana | peroxisome, plasma membrane, vacuole | 23.58 | 6.22 |
| Solyc04g078240.1.1 | Tomato | cytosol | 6.5 | 4.97 |
| CDY06751 | Canola | plasma membrane | 8.13 | 2.39 |
| Os07t0155600-01 | Rice | cytosol, peroxisome, plasma membrane | 22.76 | 2.19 |
| Solyc04g078230.1.1 | Tomato | cytosol, extracellular, plastid | 2.44 | 1.84 |
| Os03t0700800-01 | Rice | plasma membrane | 18.7 | 1.77 |
| Os07t0157401-01 | Rice | nucleus | 1.63 | 0.33 |
| Os07t0156732-01 | Rice | nucleus | 1.63 | 0.33 |
Protein Annotations
| EnsemblPlants:Os01t0733001-00 | EnsemblPlantsGene:Os01g0733001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | InterPro:NRAMP_fam |
| PANTHER:PTHR11706 | PANTHER:PTHR11706:SF8 | PFAM:PF01566 | ProteinID:BAS74202.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000393BEA3 | UniProt:A0A0P0V7T8 | MapMan:35.1 | : | : | : |
Description
Similar to NRAMP3 (NRAMP metal ion transporter 3); manganese ion transmembrane transporter/ metal ion transmembrane transporter. (Os01t0733001-00)
Coordinates
chr1:-:30574619..30575643
Molecular Weight (calculated)
13374.9 Da
IEP (calculated)
10.995
GRAVY (calculated)
-0.195
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: PWRGSGNDDS HFDDDHPFSG GGRVPPFLWR RLWLFTGPGV LMSIAFLDTG NLKGDLQAGA AARDALLWLL LWTMAMGLLV QLLSARLRVA TGRHVAELSA
101: TSTRTGRAAR SGSRTGEREE GWG
101: TSTRTGRAAR SGSRTGEREE GWG
001: MPQLENNEPL LINEEEEEET AYDETEKVHI VRNEEEDDLE HGVGCGGAPP FSWKKLWLFT GPGFLMSIAF LDPGNLEGDL QAGAVAGYSL LWLLMWATAM
101: GLLVQLLSAR LGVATGRHLA ELCRDEYPTW ARMVLWVMAE LALIGSDIQE VIGSAIAIKI LSNGILPLWA GVVITALDCF VFLFLENYGI RKLEAVFAVL
201: IATMGVSFAW MFGQAKPSGS ELLIGILVPK LSSRTIQKAV GVVGCIIMPH NVFLHSALVQ SREVDKRQKY RVQEALNYYT IESTIALFIS FLINLFVTTV
301: FAKGFYNTDL ANSIGLVNAG QYLQEKYGGG VFPILYIWAI GLLAAGQSST ITGTYAGQFI MGGFLNFKMK KWLRALITRS CAIIPTIIVA LVFDSSEATL
401: DVLNEWLNVL QSIQIPFALI PLLCLVSKEQ IMGSFKIGPL YKTIAWLVAA LVIMINGYLL LEFFSNEVSG IVYTGFVTLF TASYGAFILY LIARGITFTP
501: WPFKAESSH
101: GLLVQLLSAR LGVATGRHLA ELCRDEYPTW ARMVLWVMAE LALIGSDIQE VIGSAIAIKI LSNGILPLWA GVVITALDCF VFLFLENYGI RKLEAVFAVL
201: IATMGVSFAW MFGQAKPSGS ELLIGILVPK LSSRTIQKAV GVVGCIIMPH NVFLHSALVQ SREVDKRQKY RVQEALNYYT IESTIALFIS FLINLFVTTV
301: FAKGFYNTDL ANSIGLVNAG QYLQEKYGGG VFPILYIWAI GLLAAGQSST ITGTYAGQFI MGGFLNFKMK KWLRALITRS CAIIPTIIVA LVFDSSEATL
401: DVLNEWLNVL QSIQIPFALI PLLCLVSKEQ IMGSFKIGPL YKTIAWLVAA LVIMINGYLL LEFFSNEVSG IVYTGFVTLF TASYGAFILY LIARGITFTP
501: WPFKAESSH
Arabidopsis Description
NRAMP3Metal transporter Nramp3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNV9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.