Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46091 | Canola | cytosol, nucleus, plastid | 43.97 | 26.56 |
| CDY33364 | Canola | cytosol, peroxisome, plasma membrane | 76.72 | 18.09 |
| AT1G15960.1 | Thale cress | plasma membrane | 81.9 | 18.03 |
| Bra026089.1-P | Field mustard | plasma membrane | 71.55 | 17.73 |
| CDX67970 | Canola | plasma membrane | 73.28 | 17.56 |
| CDY63970 | Canola | plastid | 80.17 | 17.48 |
| CDY39940 | Canola | cytosol, peroxisome, plasma membrane | 76.72 | 17.15 |
| CDX87346 | Canola | cytosol, peroxisome, plasma membrane | 76.72 | 17.15 |
| CDX79348 | Canola | cytosol, plasma membrane, vacuole | 75.0 | 16.54 |
| VIT_09s0070g00210.t01 | Wine grape | plastid | 76.72 | 16.45 |
| KRH23641 | Soybean | plastid | 75.86 | 16.18 |
| KRH47347 | Soybean | plasma membrane | 75.86 | 16.15 |
| Solyc03g116900.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 72.41 | 16.09 |
| TraesCS7B01G364800.1 | Wheat | plasma membrane | 75.86 | 16.06 |
| HORVU7Hr1G106570.1 | Barley | plasma membrane | 75.86 | 16.06 |
| TraesCS7D01G451900.1 | Wheat | plasma membrane | 75.86 | 16.06 |
| Zm00001d014391_P008 | Maize | plasma membrane | 75.86 | 16.0 |
| TraesCS7A01G464300.2 | Wheat | plasma membrane | 75.0 | 15.88 |
| Os06t0676000-01 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 75.0 | 15.82 |
| EER90213 | Sorghum | plastid | 75.0 | 15.82 |
| KRH09654 | Soybean | plastid | 74.14 | 15.75 |
| Bra033988.1-P | Field mustard | plasma membrane | 73.28 | 15.65 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 72.41 | 15.47 |
| KRH44555 | Soybean | mitochondrion | 77.59 | 15.31 |
| CDY64859 | Canola | cytosol, peroxisome, plasma membrane, plastid | 80.17 | 13.98 |
| CDY57441 | Canola | peroxisome | 44.83 | 10.16 |
| CDY21478 | Canola | plasma membrane | 43.97 | 10.14 |
| CDX76871 | Canola | cytosol, peroxisome, plasma membrane | 44.83 | 10.1 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 43.97 | 9.68 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 43.97 | 9.68 |
| CDY62556 | Canola | plasma membrane | 43.97 | 9.59 |
| CDX83202 | Canola | plasma membrane | 43.97 | 9.48 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 43.1 | 9.42 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 43.1 | 9.38 |
| CDY12837 | Canola | nucleus | 44.83 | 7.81 |
| CDX70318 | Canola | plasma membrane | 30.17 | 2.92 |
| CDY10393 | Canola | plasma membrane | 29.31 | 2.84 |
| CDY06751 | Canola | plasma membrane | 9.48 | 2.63 |
| CDY35053 | Canola | mitochondrion, plasma membrane | 0.86 | 0.35 |
| CDY35054 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY35055 | EnsemblPlantsGene:GSBRNA2T00057924001 | GO:A0A078H9G3 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 |
| InterPro:NRAMP_fam | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF54 | PFAM:PF01566 | ProteinID:CDY35055 | ProteinID:CDY35055.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE50F4 | UniProt:A0A078H9G3 | MapMan:35.1 | : |
Description
BnaA06g10650DBnaA06g10650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9G3]
Coordinates
chrLK032346:-:50277..51250
Molecular Weight (calculated)
12733.9 Da
IEP (calculated)
4.545
GRAVY (calculated)
0.806
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVYILLLLH AEKELEKLLL ILIGPGFLVS IAYIDPGNFE TDLQSGAQYK YELLWIILVA SCAALVIQSL AANLGVVTGK HLAEHCRAEY SKVPNFMLWV
101: VAEIAVVACD IPEGMA
101: VAEIAVVACD IPEGMA
001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
Arabidopsis Description
NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.