Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003587.1-P | Field mustard | cytosol, plastid, vacuole | 99.38 | 91.27 |
| CDX79348 | Canola | cytosol, plasma membrane, vacuole | 97.73 | 89.92 |
| CDY63970 | Canola | plastid | 93.8 | 85.34 |
| AT1G80830.1 | Thale cress | plastid | 89.88 | 81.77 |
| CDX87346 | Canola | cytosol, peroxisome, plasma membrane | 86.98 | 81.12 |
| CDY39940 | Canola | cytosol, peroxisome, plasma membrane | 86.78 | 80.92 |
| CDY35054 | Canola | extracellular | 17.77 | 79.63 |
| CDY33364 | Canola | cytosol, peroxisome, plasma membrane | 79.34 | 78.05 |
| CDY35055 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.56 | 73.28 |
| CDY35053 | Canola | mitochondrion, plasma membrane | 42.36 | 71.18 |
| VIT_09s0070g00210.t01 | Wine grape | plastid | 78.1 | 69.87 |
| KRH23641 | Soybean | plastid | 78.31 | 69.67 |
| KRH09654 | Soybean | plastid | 77.89 | 69.05 |
| CDY64859 | Canola | cytosol, peroxisome, plasma membrane, plastid | 93.59 | 68.12 |
| KRH47347 | Soybean | plasma membrane | 76.03 | 67.52 |
| Solyc03g116900.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 71.07 | 65.9 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 72.52 | 64.64 |
| TraesCS7D01G451900.1 | Wheat | plasma membrane | 72.11 | 63.69 |
| TraesCS7A01G464300.2 | Wheat | plasma membrane | 71.9 | 63.5 |
| TraesCS7B01G364800.1 | Wheat | plasma membrane | 71.9 | 63.5 |
| EER90213 | Sorghum | plastid | 71.69 | 63.09 |
| Zm00001d014391_P008 | Maize | plasma membrane | 71.69 | 63.09 |
| HORVU7Hr1G106570.1 | Barley | plasma membrane | 71.07 | 62.77 |
| Os06t0676000-01 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 71.28 | 62.73 |
| KRH44555 | Soybean | mitochondrion | 76.03 | 62.59 |
| CDY46091 | Canola | cytosol, nucleus, plastid | 12.6 | 31.77 |
| CDX76871 | Canola | cytosol, peroxisome, plasma membrane | 33.26 | 31.26 |
| CDY57441 | Canola | peroxisome | 33.06 | 31.25 |
| CDY21478 | Canola | plasma membrane | 32.44 | 31.21 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 33.06 | 30.36 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 33.26 | 30.32 |
| CDY62556 | Canola | plasma membrane | 33.26 | 30.26 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 33.26 | 30.21 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 32.85 | 30.17 |
| CDX83202 | Canola | plasma membrane | 32.85 | 29.55 |
| CDY06751 | Canola | plasma membrane | 25.0 | 28.88 |
| CDY12837 | Canola | nucleus | 33.26 | 24.17 |
| CDY10393 | Canola | plasma membrane | 21.07 | 8.53 |
| CDX70318 | Canola | plasma membrane | 20.87 | 8.43 |
Protein Annotations
| MapMan:24.2.3.10 | GO:A0A078BTK4 | EnsemblPlants:CDX67970 | ProteinID:CDX67970 | ProteinID:CDX67970.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 |
| GO:GO:0046873 | EnsemblPlantsGene:GSBRNA2T00099182001 | HAMAP:MF_00221 | InterPro:NRAMP_fam | PFAM:PF01566 | PRINTS:PR00447 |
| PANTHER:PTHR11706 | PANTHER:PTHR11706:SF38 | TMHMM:TMhelix | UniParc:UPI0004EDB32D | SEG:seg | : |
Description
BnaA07g20100D
Coordinates
chrLK031787:-:3147130..3150826
Molecular Weight (calculated)
52511.0 Da
IEP (calculated)
8.143
GRAVY (calculated)
0.626
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASASERPQ FISNNGGNSS FSDAPLIDNS DPNQIIVPEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QSGAQYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTAEHCR AEYSKVPNFL LWVVAEIAVV ALIGTAFALN MLFHIPVWIG VLLTGLSTLM LLALQQYGVR KLEFLIAFLV FTIAICFFVE LHYSKPDPRE
201: VLHGLFVPQL KGNGATGLAI SLLGAMVMPH NLFLHSALAC SGAVCNAPDL SSEDRAKCED LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA
301: GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVAIIGGSA GAGKLIIIAS MILSFELPFA LVPLLKFTSC KMKMGSYVNP MAVSALTWVI GGLIMGINIY
401: YLVSSFIKLL VHSHMKLGLV VFCGILGFSG IAIYLASIAY LVFRRNRKAI PLLASTNSQT VETLPRQDIV DMQLHGKLAT SDVD
101: LGVVTAEHCR AEYSKVPNFL LWVVAEIAVV ALIGTAFALN MLFHIPVWIG VLLTGLSTLM LLALQQYGVR KLEFLIAFLV FTIAICFFVE LHYSKPDPRE
201: VLHGLFVPQL KGNGATGLAI SLLGAMVMPH NLFLHSALAC SGAVCNAPDL SSEDRAKCED LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA
301: GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVAIIGGSA GAGKLIIIAS MILSFELPFA LVPLLKFTSC KMKMGSYVNP MAVSALTWVI GGLIMGINIY
401: YLVSSFIKLL VHSHMKLGLV VFCGILGFSG IAIYLASIAY LVFRRNRKAI PLLASTNSQT VETLPRQDIV DMQLHGKLAT SDVD
001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD
Arabidopsis Description
NRAMP1Metal transporter Nramp1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.