Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08198 | Canola | cytosol | 78.71 | 79.22 |
| Bra017927.1-P | Field mustard | cytosol | 71.61 | 78.72 |
| CDY04648 | Canola | cytosol | 78.06 | 78.57 |
| Solyc04g058160.1.1 | Tomato | cytosol | 45.81 | 44.94 |
| PGSC0003DMT400059270 | Potato | cytosol | 45.16 | 44.59 |
| VIT_18s0001g01630.t01 | Wine grape | nucleus | 45.81 | 43.83 |
| PGSC0003DMT400059272 | Potato | cytosol | 42.58 | 42.31 |
| Solyc04g058170.1.1 | Tomato | cytosol | 41.94 | 41.67 |
| KRH64604 | Soybean | cytosol, peroxisome, plastid | 40.65 | 40.38 |
| KRH18051 | Soybean | cytosol | 40.65 | 38.41 |
| KRH16453 | Soybean | cytosol | 40.0 | 38.04 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:838756 | ProteinID:AAF87905.1 | ProteinID:AEE30116.1 | EMBL:AF361594 |
| ArrayExpress:AT1G21550 | EnsemblPlantsGene:AT1G21550 | RefSeq:AT1G21550 | TAIR:AT1G21550 | RefSeq:AT1G21550-TAIR-G | EnsemblPlants:AT1G21550.1 |
| TAIR:AT1G21550.1 | EMBL:AY133593 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0008150 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_564143.1 |
| PFAM:PF00036 | PFAM:PF13499 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF530 | UniProt:Q9LPK5 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0000162E68 | : | : | : |
Description
CML44Probable calcium-binding protein CML44 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPK5]
Coordinates
chr1:-:7552987..7553975
Molecular Weight (calculated)
17943.1 Da
IEP (calculated)
4.169
GRAVY (calculated)
-0.324
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCSFITTND LRRMFKTLDK NQDGLVTLDE LLWILDKLGW AEHTPDELEL IVGKQSLDLD EFLRFYYDAV LDSKGSKKNI DVVADNDEAI ARAFNVFDVN
101: GDGYISAEEL RDVLERLGFE EEAKAWDCGR MIRVHDKNLD GFVDFEEFKN MILHV
101: GDGYISAEEL RDVLERLGFE EEAKAWDCGR MIRVHDKNLD GFVDFEEFKN MILHV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.