Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08198 | Canola | cytosol | 99.35 | 99.35 |
| Bra017927.1-P | Field mustard | cytosol | 90.26 | 98.58 |
| AT1G21550.1 | Thale cress | cytosol | 78.57 | 78.06 |
| Solyc04g058160.1.1 | Tomato | cytosol | 46.75 | 45.57 |
| PGSC0003DMT400059270 | Potato | cytosol | 46.1 | 45.22 |
| VIT_18s0001g01630.t01 | Wine grape | nucleus | 47.4 | 45.06 |
| PGSC0003DMT400059272 | Potato | cytosol | 44.16 | 43.59 |
| Solyc04g058170.1.1 | Tomato | cytosol | 43.51 | 42.95 |
| KRH64604 | Soybean | cytosol, peroxisome, plastid | 40.91 | 40.38 |
| KRH18051 | Soybean | cytosol | 42.21 | 39.63 |
| KRH16453 | Soybean | cytosol | 40.91 | 38.65 |
Protein Annotations
| EnsemblPlants:CDY04648 | EnsemblPlantsGene:GSBRNA2T00119245001 | Gene3D:1.10.238.10 | GO:A0A078EYF0 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF530 | PFAM:PF13202 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:CDY04648 | ProteinID:CDY04648.1 |
| ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EDBEFE | MapMan:35.1 | : |
Description
BnaC05g16860D
Coordinates
chrLK031956:-:603773..604237
Molecular Weight (calculated)
17982.0 Da
IEP (calculated)
4.147
GRAVY (calculated)
-0.518
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCSFISIND LQRMFHKLDK NQDGLVTLDE LHWILERLGW SEHTPEELEL FVGKQSLDLD EFLRFYDDAV SDRKETKNDS VVDNDDAIVG AFNVFDVNGD
101: GYISSEELRT VLERIGFEEE TKSWDCGRMI RAHDKNLDGV IDFEEFKNMM LHVQ
101: GYISSEELRT VLERIGFEEE TKSWDCGRMI RAHDKNLDGV IDFEEFKNMM LHVQ
001: MDCSFITTND LRRMFKTLDK NQDGLVTLDE LLWILDKLGW AEHTPDELEL IVGKQSLDLD EFLRFYYDAV LDSKGSKKNI DVVADNDEAI ARAFNVFDVN
101: GDGYISAEEL RDVLERLGFE EEAKAWDCGR MIRVHDKNLD GFVDFEEFKN MILHV
101: GDGYISAEEL RDVLERLGFE EEAKAWDCGR MIRVHDKNLD GFVDFEEFKN MILHV
Arabidopsis Description
CML44Probable calcium-binding protein CML44 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.