Factsheet for AT1G62700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46914	Canola	nucleus	75.13	81.99
CDY31835	Canola	nucleus	73.6	80.33
Bra027024.1-P	Field mustard	nucleus	79.19	79.59
AT1G12260.1	Thale cress	nucleus	76.65	76.46
VIT_02s0154g00020.t01	Wine grape	nucleus	58.88	64.99
KRH57345	Soybean	nucleus	55.58	60.16
KRH04074	Soybean	nucleus	55.84	60.11
Solyc08g079120.1.1	Tomato	cytosol, nucleus, plastid	46.19	59.28
KRH28034	Soybean	nucleus	53.3	58.33
PGSC0003DMT400012079	Potato	nucleus	41.62	55.03
AT5G66300.1	Thale cress	nucleus	39.85	53.77
AT2G18060.1	Thale cress	nucleus	44.42	47.95
AT4G36160.2	Thale cress	nucleus	45.43	46.98
AT5G62380.1	Thale cress	nucleus	40.1	45.4
AT1G71930.2	Thale cress	nucleus	35.03	42.59
AT3G61910.1	Thale cress	nucleus	35.79	42.22
AT2G46770.1	Thale cress	nucleus	36.8	39.73
AT1G32770.1	Thale cress	nucleus	35.53	39.11
AT1G33280.1	Thale cress	nucleus	29.44	38.03
AT4G10350.1	Thale cress	nucleus	30.2	34.9
AT1G79580.4	Thale cress	nucleus	31.22	33.15
Os04t0443801-02	Rice	mitochondrion	0.0	0.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:842568	ProteinID:AAF19551.1	ProteinID:AEE33995.1	ProteinID:ANM59940.1
ArrayExpress:AT1G62700	EnsemblPlantsGene:AT1G62700	RefSeq:AT1G62700	TAIR:AT1G62700	RefSeq:AT1G62700-TAIR-G	EnsemblPlants:AT1G62700.1
TAIR:AT1G62700.1	Unigene:At.52328	UniProt:F4HYV5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0030154	GO:GO:0043565
GO:GO:0048759	GO:GO:0071555	GO:GO:1901348	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	RefSeq:NP_001319296.1	RefSeq:NP_176457.1	PFAM:PF02365	PO:PO:0000039	PO:PO:0000230
PO:PO:0000293	PO:PO:0003011	PO:PO:0007611	PO:PO:0009046	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF3	SUPFAM:SSF101941	UniParc:UPI00001631DC	Symbol:VND5	SEG:seg	:

Description

NAC026NAC domain-containing protein 26 [Source:UniProtKB/Swiss-Prot;Acc:F4HYV5]

Coordinates

chr1:-:23215953..23219209

Molecular Weight (calculated)

45587.9 Da

IEP (calculated)

6.639

GRAVY (calculated)

-0.907

Length

394 amino acids

Sequence
(BLAST)

001: MNSFSQVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDIIK DVDLYKIEPC DLQELCKIGN EEQSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YIRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETSEN GTPQEEGWVV CRVFKKKLAA TVRKMGDYHS SPSQHWYDDQ LSFMASEIIS SSPRQFLPNH
201: HYNRHHHQQT LPCGLNAFNN NNPNLQCKQE LELHYNQMVQ HQQQNHHLRE SMFLQLPQLE SPTSNCNSDN NNNTRNISNL QKSSNISHEE QLQQGNQSFS
301: SLYYDQGVEQ MTTDWRVLDK FVASQLSNDE EAAAVVSSSS HQNNVKIDTR NTGYHVIDEG INLPENDSER VVEMGEEYSN AHAASTSSSC QIDL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.