Factsheet for Solyc08g079120.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012079	Potato	nucleus	80.78	83.22
VIT_02s0154g00020.t01	Wine grape	nucleus	65.15	56.02
KRH28034	Soybean	nucleus	65.47	55.83
KRH57345	Soybean	nucleus	65.15	54.95
KRH04074	Soybean	nucleus	64.82	54.37
CDY21041	Canola	nucleus	61.24	53.26
Solyc06g034340.1.1	Tomato	nucleus	58.96	53.24
Solyc03g083880.2.1	Tomato	nucleus	54.07	53.21
CDY31249	Canola	nucleus	61.56	51.78
CDX98078	Canola	nucleus	56.35	51.18
CDY15987	Canola	nucleus	56.35	51.03
CDY46914	Canola	nucleus	59.93	50.97
CDY26551	Canola	nucleus	56.03	50.59
Bra026981.1-P	Field mustard	nucleus	56.03	50.59
CDY31835	Canola	nucleus	59.28	50.42
AT1G12260.1	Thale cress	nucleus	62.22	48.35
Bra016783.1-P	Field mustard	nucleus	60.91	48.2
CDY30057	Canola	nucleus	61.24	47.72
Solyc02g084350.2.1	Tomato	nucleus	54.07	47.56
Bra019750.1-P	Field mustard	nucleus	60.59	47.33
AT1G62700.1	Thale cress	nucleus	59.28	46.19
Bra027024.1-P	Field mustard	nucleus	57.65	45.15
Solyc10g005010.2.1	Tomato	nucleus	41.04	43.9
Solyc11g018660.1.1	Tomato	nucleus	43.32	42.77
Solyc12g017400.1.1	Tomato	nucleus	44.3	42.63
Solyc06g065410.2.1	Tomato	nucleus	43.97	41.93
Solyc08g008660.2.1	Tomato	nucleus	44.3	38.97
Solyc06g063430.1.1	Tomato	nucleus	38.76	37.42
Os04t0443801-02	Rice	mitochondrion	0.0	0.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4CNS1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc08g079120.1	EnsemblPlants:Solyc08g079120.1.1	UniParc:UPI000276B0EE
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:62760058..62764002

Molecular Weight (calculated)

35947.3 Da

IEP (calculated)

8.612

GRAVY (calculated)

-0.796

Length

307 amino acids

Sequence
(BLAST)

001: MNSFAHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK EIDLYKIEPW DLQELCKIGS EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YRKQCLVGMR KTLVFYKGRA PNGQKSDYIM HEYRLETNEN ANTIQEEGWA VCRVFKKKLA TSIRREGDQL YQHESLCWYN DDQLVSNFTS NFDSPPRNNF
201: PNPYNVTPSY HHQLPYNNMH QNPHNNDALF LQLPQLESPK IPPSYGSINN NSMYNNNNNY DQVTDWRVLD KFVASQLSTQ QDGYNGACSS STLTLIYLRI
301: LKAILLI

Best Arabidopsis Sequence Match ( AT1G62700.2 )
(BLAST)

001: MNSFSQVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDIIK DVDLYKIEPC DLQELCKIGN EEQSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YIRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETSEN GTPQEEGWVV CRVFKKKLAA TVRKMGDYHS SPSQHWYDDQ LSFMASEIIS SSPRQFLPNH
201: HYNRHHHQQT LPCGLNAFNN NNPNLQCKQE LELHYNQMVQ HQQQNHHLRE SMFLQLPQLE SPTSNCNSDN NNNTRNISNL QKSSNISHEE QLQQGNQSFS
301: SLYYDQGVEQ MTTDWRVLDK FVASQLSNDE EAAAVVSSSS HQNNVKIDTR NTGYHVIDEG INLPENDSER VVEMGEEYSN AHAASTSSSC QIDL

Arabidopsis Description

NAC026NAC domain-containing protein 26 [Source:UniProtKB/Swiss-Prot;Acc:F4HYV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.