Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026981.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY15987 | Canola | nucleus | 97.35 | 97.64 |
| CDX98078 | Canola | nucleus | 95.29 | 95.86 |
| CDY21041 | Canola | nucleus | 85.29 | 82.15 |
| CDY31249 | Canola | nucleus | 84.12 | 78.36 |
| AT1G12260.1 | Thale cress | nucleus | 90.0 | 77.47 |
| CDY30057 | Canola | nucleus | 88.82 | 76.65 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 34.41 | 73.58 |
| CDY46914 | Canola | nucleus | 69.12 | 65.1 |
| CDY72666 | Canola | nucleus | 30.88 | 64.42 |
| CDY31835 | Canola | nucleus | 67.94 | 63.99 |
| CDY70728 | Canola | nucleus | 30.88 | 58.66 |
| VIT_02s0154g00020.t01 | Wine grape | nucleus | 60.88 | 57.98 |
| KRH57345 | Soybean | nucleus | 61.18 | 57.14 |
| KRH04074 | Soybean | nucleus | 60.59 | 56.28 |
| Solyc08g079120.1.1 | Tomato | cytosol, nucleus, plastid | 50.59 | 56.03 |
| CDY35029 | Canola | cytosol | 32.35 | 52.88 |
| KRH28034 | Soybean | nucleus | 55.29 | 52.22 |
| PGSC0003DMT400012079 | Potato | nucleus | 45.59 | 52.01 |
| CDY00280 | Canola | nucleus | 38.53 | 50.38 |
| CDY62781 | Canola | nucleus | 23.24 | 50.0 |
| CDY45221 | Canola | nucleus | 42.94 | 49.66 |
| CDY30778 | Canola | nucleus | 42.65 | 49.15 |
| CDY47055 | Canola | nucleus | 46.47 | 48.32 |
| CDX72580 | Canola | nucleus | 46.47 | 46.61 |
| CDX69208 | Canola | nucleus | 46.76 | 46.36 |
| CDX87246 | Canola | nucleus | 45.0 | 45.54 |
| CDY16776 | Canola | nucleus | 44.41 | 45.48 |
| CDY58006 | Canola | nucleus | 46.18 | 45.11 |
| CDX75558 | Canola | nucleus | 45.0 | 44.61 |
| CDY38177 | Canola | nucleus | 46.47 | 43.77 |
| CDY30716 | Canola | nucleus | 45.88 | 43.21 |
| CDY26917 | Canola | nucleus | 37.65 | 41.56 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 39.12 | 41.3 |
| CDY03671 | Canola | nucleus | 38.53 | 40.06 |
| CDX82202 | Canola | nucleus | 38.53 | 40.06 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 39.12 | 40.06 |
| CDX96362 | Canola | nucleus | 37.94 | 39.69 |
| CDX72846 | Canola | nucleus | 37.94 | 39.69 |
| CDX73267 | Canola | cytosol | 37.35 | 39.08 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 37.35 | 38.96 |
| CDY41554 | Canola | nucleus | 40.88 | 38.94 |
| CDY27524 | Canola | nucleus | 41.47 | 38.74 |
| CDX80045 | Canola | nucleus | 40.88 | 38.72 |
| CDX67870 | Canola | nucleus | 37.65 | 38.1 |
| CDX93819 | Canola | nucleus | 39.12 | 36.54 |
| CDY01243 | Canola | nucleus | 39.12 | 35.85 |
| CDX90756 | Canola | nucleus | 33.82 | 34.64 |
| CDY05099 | Canola | nucleus | 33.82 | 34.53 |
| CDY22285 | Canola | nucleus | 34.12 | 33.43 |
| CDY71976 | Canola | nucleus | 33.82 | 32.95 |
| CDX87372 | Canola | nucleus | 34.41 | 32.5 |
| CDX88550 | Canola | nucleus | 34.41 | 32.23 |
| CDY70056 | Canola | nucleus | 33.53 | 31.93 |
| CDY00281 | Canola | cytosol | 5.59 | 28.36 |
| Os04t0443801-02 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GMN2 | UniProt:A0A078GMN2 | EnsemblPlants:CDY26551 | ProteinID:CDY26551 |
| ProteinID:CDY26551.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00035413001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | UniParc:UPI0002542897 | SEG:seg | : | : |
Description
BnaA09g47260DBnaA09g47260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMN2]
Coordinates
chrLK032192:-:100907..102493
Molecular Weight (calculated)
39553.0 Da
IEP (calculated)
6.379
GRAVY (calculated)
-0.894
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLLELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYMGRA PNGQKSDWIM HEYRLETDEN GAPQEEGWVV CRVFKKRLPA VIRRMGDYDS SPSRWYDEQL SFMASELETN GPRRIVPNHH
201: QQQHHQPFSY GINASAYALN NPNLQCKQEL ELQYSHLQSN QVHEEQMNQG NQSFSSLYMN SGNGQTMDQV TDWRSLDKFV ASQLSNEEAA TASASLQNNG
301: KDTSNVEYQI DEEKDQKRVS DMGEEYVAST SSSCQIDLWK
101: YLRHSLIGMR KTLVFYMGRA PNGQKSDWIM HEYRLETDEN GAPQEEGWVV CRVFKKRLPA VIRRMGDYDS SPSRWYDEQL SFMASELETN GPRRIVPNHH
201: QQQHHQPFSY GINASAYALN NPNLQCKQEL ELQYSHLQSN QVHEEQMNQG NQSFSSLYMN SGNGQTMDQV TDWRSLDKFV ASQLSNEEAA TASASLQNNG
301: KDTSNVEYQI DEEKDQKRVS DMGEEYVAST SSSCQIDLWK
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.