Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 41.92 | 73.65 |
| CDY58006 | Canola | nucleus | 95.77 | 71.55 |
| AT5G62380.1 | Thale cress | nucleus | 90.38 | 67.53 |
| CDY16776 | Canola | nucleus | 86.15 | 67.47 |
| Os04t0536500-01 | Rice | cytosol | 41.92 | 67.28 |
| CDX87246 | Canola | nucleus | 85.77 | 66.37 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 40.38 | 66.04 |
| Bra029266.1-P | Field mustard | nucleus | 90.77 | 64.84 |
| Zm00001d045600_P001 | Maize | nucleus | 34.62 | 64.75 |
| Zm00001d051294_P001 | Maize | cytosol | 43.46 | 64.57 |
| CDY30716 | Canola | nucleus | 89.62 | 64.54 |
| CDY72666 | Canola | nucleus | 37.31 | 59.51 |
| CDY70728 | Canola | nucleus | 38.08 | 55.31 |
| CDY35029 | Canola | cytosol | 41.15 | 51.44 |
| Zm00001d017396_P001 | Maize | nucleus | 37.69 | 46.01 |
| CDY62781 | Canola | nucleus | 26.15 | 43.04 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 52.69 | 40.77 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 52.31 | 40.48 |
| CDY45221 | Canola | nucleus | 45.77 | 40.48 |
| CDY30778 | Canola | nucleus | 45.77 | 40.34 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 51.92 | 40.18 |
| OQU75680 | Sorghum | nucleus | 52.31 | 40.12 |
| Solyc03g083880.2.1 | Tomato | nucleus | 48.08 | 40.06 |
| OQU82026 | Sorghum | nucleus | 52.31 | 40.0 |
| KRH62610 | Soybean | nucleus | 52.31 | 39.88 |
| KRH23801 | Soybean | nucleus | 53.08 | 39.77 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 51.92 | 39.71 |
| KXG31125 | Sorghum | nucleus | 52.69 | 39.48 |
| CDX98078 | Canola | nucleus | 51.15 | 39.35 |
| Zm00001d002828_P001 | Maize | cytosol | 51.54 | 38.95 |
| KRH39986 | Soybean | nucleus | 52.69 | 38.7 |
| CDY15987 | Canola | nucleus | 50.38 | 38.64 |
| HORVU2Hr1G092030.2 | Barley | cytosol, nucleus, peroxisome | 50.38 | 38.64 |
| CDY26551 | Canola | nucleus | 50.38 | 38.53 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 46.92 | 38.36 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 51.92 | 38.35 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 51.92 | 38.35 |
| KRH56355 | Soybean | nucleus | 53.46 | 38.29 |
| CDY47055 | Canola | nucleus | 48.08 | 38.23 |
| GSMUA_Achr11P... | Banana | nucleus | 46.54 | 38.17 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 52.69 | 38.16 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 49.62 | 38.05 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 49.62 | 38.05 |
| CDY21041 | Canola | nucleus | 51.54 | 37.96 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 51.92 | 37.92 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 49.23 | 37.76 |
| Os02t0643600-00 | Rice | nucleus | 53.46 | 37.57 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 50.0 | 37.25 |
| GSMUA_Achr11P... | Banana | nucleus | 50.0 | 36.93 |
| CDX72580 | Canola | nucleus | 48.08 | 36.87 |
| CDX69208 | Canola | nucleus | 48.08 | 36.44 |
| CDY31249 | Canola | nucleus | 51.15 | 36.44 |
| CDY46914 | Canola | nucleus | 50.38 | 36.29 |
| CDX75558 | Canola | nucleus | 47.69 | 36.15 |
| CDY31835 | Canola | nucleus | 50.0 | 36.01 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 52.31 | 35.7 |
| CDX82202 | Canola | nucleus | 44.62 | 35.47 |
| CDY03671 | Canola | nucleus | 44.23 | 35.17 |
| Os06t0104200-01 | Rice | nucleus | 49.23 | 35.16 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 49.62 | 34.96 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 43.08 | 34.78 |
| CDX72846 | Canola | nucleus | 43.46 | 34.77 |
| CDX96362 | Canola | nucleus | 43.08 | 34.46 |
| CDY38177 | Canola | nucleus | 47.31 | 34.07 |
| CDY26917 | Canola | nucleus | 40.0 | 33.77 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 43.08 | 33.73 |
| CDY30057 | Canola | nucleus | 50.77 | 33.5 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 41.92 | 33.44 |
| CDX67870 | Canola | nucleus | 41.92 | 32.44 |
| CDY27524 | Canola | nucleus | 45.38 | 32.42 |
| CDY41554 | Canola | nucleus | 44.23 | 32.21 |
| CDX90756 | Canola | nucleus | 40.77 | 31.93 |
| CDY05099 | Canola | nucleus | 40.77 | 31.83 |
| CDX80045 | Canola | nucleus | 43.85 | 31.75 |
| CDX73267 | Canola | cytosol | 39.62 | 31.69 |
| CDX93819 | Canola | nucleus | 41.15 | 29.4 |
| CDY22285 | Canola | nucleus | 39.23 | 29.39 |
| CDX87372 | Canola | nucleus | 40.38 | 29.17 |
| CDX88550 | Canola | nucleus | 40.38 | 28.93 |
| CDY70056 | Canola | nucleus | 39.62 | 28.85 |
| CDY01243 | Canola | nucleus | 41.15 | 28.84 |
| CDY71976 | Canola | nucleus | 38.08 | 28.37 |
| CDY00281 | Canola | cytosol | 0.38 | 1.49 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078EDW7 | EnsemblPlants:CDY00280 | ProteinID:CDY00280 | ProteinID:CDY00280.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00109854001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | UniParc:UPI0004EDE4E4 | : | : | : |
Description
BnaA06g21810D
Coordinates
chrLK031917:+:741462..742368
Molecular Weight (calculated)
29849.2 Da
IEP (calculated)
5.993
GRAVY (calculated)
-0.747
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLSLIPPG YRFHPTDEEL VDYYLKKKVA FPGMQVDVIK DVDLYKIEPW DIHELCGRGT GEEREWYFFS HKEKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIL HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MMNYNNPRTM MGSSSSGQES NWFVQEMDVA NGSYYHLPDL
201: ESPRMFQASS SSLHHNDNDP YGGVLSTINA TPTTLMQGDD QVDHGQVITN DDDHMIMMII
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIL HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MMNYNNPRTM MGSSSSGQES NWFVQEMDVA NGSYYHLPDL
201: ESPRMFQASS SSLHHNDNDP YGGVLSTINA TPTTLMQGDD QVDHGQVITN DDDHMIMMII
001: MESLAHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
Arabidopsis Description
NAC101NAC domain-containing protein 101 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.