Factsheet for Bra029266.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010077.1-P
Bra029264.1-P
Bra029266.1-P
Bra035896.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	Bra010077.1-P	AT5G62380.1	18445131
AT5G62380.1	Bra029264.1-P	AT5G62380.1	18445131
AT5G62380.1	Bra029266.1-P	AT5G62380.1	18445131
AT5G62380.1	Bra035896.1-P	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00280	Canola	nucleus	64.84	90.77
AT5G62380.1	Thale cress	nucleus	85.44	89.37
Bra010077.1-P	Field mustard	nucleus	84.89	89.05
Bra029264.1-P	Field mustard	nucleus	71.43	85.53
CDY00281	Canola	cytosol	15.66	85.07
Bra035896.1-P	Field mustard	nucleus	76.65	84.04
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	31.04	76.35
Os04t0536500-01	Rice	cytosol	31.04	69.75
Zm00001d045600_P001	Maize	nucleus	25.55	66.91
Zm00001d051294_P001	Maize	cytosol	32.14	66.86
OQU82026	Sorghum	nucleus	45.33	48.53
Solyc03g083880.2.1	Tomato	nucleus	41.48	48.4
Zm00001d017396_P001	Maize	nucleus	28.3	48.36
KRH62610	Soybean	nucleus	44.78	47.8
KRH23801	Soybean	nucleus	45.33	47.55
GSMUA_Achr7P06640_001	Banana	nucleus	43.96	47.06
Bra039915.1-P	Field mustard	nucleus	34.89	47.04
TraesCS4A01G486200.1	Wheat	nucleus	43.41	47.02
TraesCS7D01G008500.1	Wheat	nucleus	43.41	47.02
TraesCS7A01G008800.1	Wheat	nucleus	43.13	46.73
KRH39986	Soybean	nucleus	45.05	46.33
Zm00001d002828_P001	Maize	cytosol	43.68	46.22
OQU75680	Sorghum	nucleus	42.86	46.02
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	45.33	45.96
Bra026981.1-P	Field mustard	nucleus	42.86	45.88
GSMUA_Achr11P...	Banana	nucleus	39.84	45.74
KXG31125	Sorghum	nucleus	43.41	45.53
TraesCS6A01G237900.1	Wheat	nucleus	43.96	45.45
TraesCS6D01G220600.1	Wheat	nucleus	43.96	45.45
KRH56355	Soybean	nucleus	45.33	45.45
GSMUA_Achr8P11590_001	Banana	cytosol	39.29	44.97
HORVU6Hr1G060800.3	Barley	nucleus	43.96	44.94
Bra012065.1-P	Field mustard	nucleus	35.99	44.86
HORVU2Hr1G092030.2	Barley	cytosol, nucleus, peroxisome	41.21	44.25
GSMUA_Achr11P...	Banana	nucleus	42.58	44.03
TraesCS2B01G403300.1	Wheat	cytosol, nucleus, peroxisome	40.93	43.95
TraesCS2A01G386300.1	Wheat	cytosol, nucleus, peroxisome	40.93	43.95
TraesCS2D01G382800.1	Wheat	cytosol, nucleus, peroxisome	40.66	43.66
HORVU7Hr1G000140.6	Barley	nucleus	41.76	43.55
Os02t0643600-00	Rice	nucleus	43.96	43.24
TraesCS6B01G286200.1	Wheat	cytosol	44.23	42.26
Os06t0104200-01	Rice	nucleus	41.76	41.76
Bra016783.1-P	Field mustard	nucleus	44.23	41.49
GSMUA_Achr6P36840_001	Banana	nucleus	41.76	41.19
Bra019750.1-P	Field mustard	nucleus	43.41	40.2
Bra007640.1-P	Field mustard	cytosol, nucleus, plastid	34.62	39.13
Bra027024.1-P	Field mustard	nucleus	42.03	39.03
Bra017750.1-P	Field mustard	nucleus	39.29	38.65
Bra007996.1-P	Field mustard	nucleus	34.62	38.53
Bra016098.1-P	Field mustard	nucleus	34.07	38.39
Bra011667.1-P	Field mustard	nucleus	39.01	38.27
Bra010183.1-P	Field mustard	nucleus	31.59	37.34
Bra003478.1-P	Field mustard	nucleus	34.34	37.2
Bra040486.1-P	Field mustard	nucleus	35.71	35.71
Bra004509.1-P	Field mustard	nucleus	35.16	35.65
Bra000709.1-P	Field mustard	nucleus	32.69	34.9
Bra037914.1-P	Field mustard	nucleus	32.14	34.21
Bra023288.1-P	Field mustard	nucleus	32.97	32.97
Bra035127.1-P	Field mustard	nucleus	31.59	32.03
Bra003602.1-P	Field mustard	nucleus	30.49	31.09
Bra008423.1-P	Field mustard	nucleus	29.67	30.95

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra029266	EnsemblPlants:Bra029266.1	EnsemblPlants:Bra029266.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EKE9	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF3	SUPFAM:SSF101941
UniParc:UPI0002545BC2	SEG:seg	:	:	:	:

Description

AT5G62380 (E=2e-133) VND6, ANAC101 | ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101); transcription activator/ transcription factor/ transcription regulator

Coordinates

chrA02:+:26239392..26240622

Molecular Weight (calculated)

41777.0 Da

IEP (calculated)

5.225

GRAVY (calculated)

-0.944

Length

364 amino acids

Sequence
(BLAST)

001: MESLTHIPPG YRFHPTDEEL VDYYLKKKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MSYNNPRTMM GSSGQESNWF THQMHVANGS YYHLPDLESP
201: RMFQGSSSSH HNDNDPYGVV LSTINATPTT LVQGDDEEDH GNIITNDDDD GHIITNDDDH GHFITNDNMI MMNTNTDHHH HHQSGLLLSD DHNDHMMDWQ
301: TLDKLVASQL IMSQEEEEVN KDPSDNSSNE TFHHHLSEEQ ATIASMNASS SPCSFYSWPQ NTNT

Best Arabidopsis Sequence Match ( AT5G62380.1 )
(BLAST)

001: MESLAHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT

Arabidopsis Description

NAC101NAC domain-containing protein 101 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.