Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0643600-00 | |
| Os04t0536500-01 | |
| Os06t0104200-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G62380.1 | Os02t0643600-00 | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Os04t0536500-01 | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Os06t0104200-01 | AT5G62380.1 | 18445131 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045600_P001 | Maize | nucleus | 30.22 | 79.14 |
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 31.87 | 78.38 |
| Os04t0536500-01 | Rice | cytosol | 33.24 | 74.69 |
| OQU75680 | Sorghum | nucleus | 64.56 | 69.32 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 62.64 | 67.86 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 62.09 | 67.26 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 62.09 | 67.26 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 60.99 | 63.61 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 54.95 | 58.82 |
| KRH23801 | Soybean | nucleus | 51.92 | 54.47 |
| KRH62610 | Soybean | nucleus | 50.82 | 54.25 |
| KRH39986 | Soybean | nucleus | 52.2 | 53.67 |
| Solyc06g034340.1.1 | Tomato | nucleus | 49.45 | 52.94 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 52.2 | 52.92 |
| Solyc03g083880.2.1 | Tomato | nucleus | 44.78 | 52.24 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 51.65 | 50.95 |
| Os02t0643600-00 | Rice | nucleus | 51.65 | 50.81 |
| KRH56355 | Soybean | nucleus | 50.55 | 50.69 |
| Os06t0530400-01 | Rice | cytosol, nucleus, peroxisome | 28.02 | 50.49 |
| CDY00280 | Canola | nucleus | 35.16 | 49.23 |
| Os08t0115800-01 | Rice | nucleus | 32.69 | 47.04 |
| CDX87246 | Canola | nucleus | 41.21 | 44.64 |
| CDY16776 | Canola | nucleus | 40.38 | 44.28 |
| Os10t0532000-01 | Rice | cytosol | 41.21 | 43.99 |
| Bra035896.1-P | Field mustard | nucleus | 40.11 | 43.98 |
| AT5G62380.1 | Thale cress | nucleus | 41.76 | 43.68 |
| CDY58006 | Canola | nucleus | 41.76 | 43.68 |
| Bra010077.1-P | Field mustard | nucleus | 41.21 | 43.23 |
| CDY30716 | Canola | nucleus | 42.03 | 42.38 |
| Bra029266.1-P | Field mustard | nucleus | 41.76 | 41.76 |
| Os08t0103900-01 | Rice | nucleus | 35.16 | 39.51 |
| Os02t0252200-01 | Rice | nucleus | 36.81 | 37.33 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 28.02 | 35.66 |
| Bra029264.1-P | Field mustard | nucleus | 29.12 | 34.87 |
| Os06t0131700-01 | Rice | nucleus | 37.64 | 34.68 |
| CDY00281 | Canola | cytosol | 4.67 | 25.37 |
| Os04t0443801-02 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:4339853 | ProteinID:BAC22229.1 | ProteinID:BAF18463.1 | ProteinID:BAS95731.1 |
| ProteinID:EAZ35537.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| EMBL:JN634076 | InterPro:NAC-dom | InterPro:NAC_dom_sf | EnsemblPlantsGene:Os06g0104200 | EnsemblPlants:Os06t0104200-01 | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF105 | UniProt:Q8H624 | SUPFAM:SSF101941 | UniParc:UPI00000AD4E2 |
| RefSeq:XP_015642963.1 | RefSeq:XP_015642964.1 | SEG:seg | : | : | : |
Description
NAC DOMAIN-CONTAINING PROTEIN 90Similar to OsNAC7 protein. (Os06t0104200-01)
Coordinates
chr6:-:289313..294071
Molecular Weight (calculated)
41572.4 Da
IEP (calculated)
6.829
GRAVY (calculated)
-0.809
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGSSMSSSS TQQQAQVPPG FRFHPTDEEL VDYYLRKKVA ARRIDLNVIK DVDLYKIEPW DLQERCRING GSAAEEQNEW YFFSHKDKKY PTGTRTNRAT
101: AAGFWKATGR DKPIYATKQH SLLVGMRKTL VYYRGRAPNG HKSDWIMHEY RLETTETAPP QEEGWVVCRV FKKRLPTTRR DSDHDAPCGS WYVDEDAPGA
201: FMSPMMITRS SILRPHQHHA GITLQEQHLH TTYKHRDLTT KIQQLQVPAA GHHLLNTMPH DLESSTSSFH SLLVSPDHHQ INMHHAQADP FFDDMHAVDQ
301: ATTTDWRVLD KFVASQLSND ATNKPADHYT DEGDILQVSD KQQEVAAADY ASTSTSSSQI DPWK
101: AAGFWKATGR DKPIYATKQH SLLVGMRKTL VYYRGRAPNG HKSDWIMHEY RLETTETAPP QEEGWVVCRV FKKRLPTTRR DSDHDAPCGS WYVDEDAPGA
201: FMSPMMITRS SILRPHQHHA GITLQEQHLH TTYKHRDLTT KIQQLQVPAA GHHLLNTMPH DLESSTSSFH SLLVSPDHHQ INMHHAQADP FFDDMHAVDQ
301: ATTTDWRVLD KFVASQLSND ATNKPADHYT DEGDILQVSD KQQEVAAADY ASTSTSSSQI DPWK
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.