Factsheet for HORVU7Hr1G000140.6

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G092030.2
HORVU6Hr1G060800.3
HORVU7Hr1G000140.6

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	HORVU2Hr1G092030.2	AT5G62380.1	18445131
AT5G62380.1	HORVU6Hr1G060800.3	AT5G62380.1	18445131
AT5G62380.1	HORVU7Hr1G000140.6	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G008800.1	Wheat	nucleus	89.68	93.15
TraesCS7D01G008500.1	Wheat	nucleus	88.83	92.26
TraesCS4A01G486200.1	Wheat	nucleus	88.54	91.96
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	35.53	83.78
OQU75680	Sorghum	nucleus	78.51	80.83
Zm00001d045600_P001	Maize	nucleus	31.23	78.42
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	12.32	68.25
Os06t0104200-01	Rice	nucleus	63.61	60.99
GSMUA_Achr7P06640_001	Banana	nucleus	57.31	58.82
KRH23801	Soybean	nucleus	55.3	55.62
KRH39986	Soybean	nucleus	55.87	55.08
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	55.87	54.32
KRH62610	Soybean	nucleus	53.01	54.25
HORVU6Hr1G060800.3	Barley	nucleus	54.73	53.65
Solyc03g083880.2.1	Tomato	nucleus	47.28	52.88
Solyc06g034340.1.1	Tomato	nucleus	51.29	52.65
KRH56355	Soybean	nucleus	54.15	52.07
HORVU2Hr1G092030.2	Barley	cytosol, nucleus, peroxisome	50.43	51.92
CDY00280	Canola	nucleus	37.25	50.0
GSMUA_Achr6P36840_001	Banana	nucleus	52.15	49.32
CDY16776	Canola	nucleus	42.98	45.18
Bra035896.1-P	Field mustard	nucleus	42.69	44.88
CDX87246	Canola	nucleus	42.69	44.35
AT5G62380.1	Thale cress	nucleus	44.13	44.25
Bra010077.1-P	Field mustard	nucleus	43.84	44.09
CDY58006	Canola	nucleus	43.55	43.68
CDY30716	Canola	nucleus	43.84	42.38
Bra029266.1-P	Field mustard	nucleus	43.55	41.76
HORVU4Hr1G083050.3	Barley	cytosol, mitochondrion, nucleus	42.69	40.49
HORVU2Hr1G126080.3	Barley	nucleus	36.68	40.0
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	28.37	38.82
HORVU2Hr1G126040.14	Barley	nucleus	34.67	37.93
HORVU7Hr1G079500.1	Barley	nucleus	38.11	35.95
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	40.69	35.68
Bra029264.1-P	Field mustard	nucleus	30.37	34.87
HORVU7Hr1G012780.1	Barley	nucleus	37.82	29.46
HORVU7Hr1G012760.6	Barley	plastid	38.4	29.26
CDY00281	Canola	cytosol	5.16	26.87

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A287VAY1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G000140	EnsemblPlants:HORVU7Hr1G000140.6	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF105	SUPFAM:SSF101941	UniParc:UPI000B47A938
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:184380..186051

Molecular Weight (calculated)

37499.8 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.841

Length

349 amino acids

Sequence
(BLAST)

001: TDRSDDMSGS TQPQVPPGFR FHPTDEELVD YYLRKKVASR RIDLNVIKDV DLYKIEPWDL QEKCRIGPEE EQSDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKPIY AKHCLVGMRK TLVYYKGRAP NGQKSDWIMH EYRLETNENG PPQEEGWVVC RVFKKRLPTT RRDLDHDAPC XXXXXXXXXX XXXXXXXXXX
201: XXXXXXMPPH HSMALQEQHL QMLNNTYKRE LKLQYQMPNH HHVLNTIPHE LESPSSFHSL LVSQDDHQIN VHHAQHHHVQ LIDHAVDDQA ATDWRVLDKF
301: VASQLSNDAA KGVDYAHEGD ILQLNEKVQE VATDYASTST SSSQVDPWK

Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.