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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • nucleus 1
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G012740.1 Barley cytosol, nucleus, plastid 13.32 96.83
TraesCS7A01G068200.1 Wheat cytosol, nucleus, plastid 36.68 84.42
TraesCS7D01G062300.1 Wheat cytosol, nucleus, plastid 75.11 83.7
TraesCS4A01G421200.1 Wheat nucleus 73.58 83.21
TraesCS4A01G421100.1 Wheat nucleus 70.52 80.95
HORVU7Hr1G012730.2 Barley cytosol, nucleus 44.54 80.0
TraesCS7D01G062400.1 Wheat nucleus 70.52 79.95
TraesCS7D01G062600.1 Wheat cytosol, nucleus, plastid 68.12 78.99
TraesCS4A01G420900.1 Wheat cytosol, nucleus, plastid 68.78 78.55
TraesCS4A01G420000.1 Wheat cytosol, nucleus, plastid 67.47 78.43
TraesCS7D01G063300.1 Wheat cytosol, nucleus, plastid 69.0 78.41
TraesCS4A01G420200.1 Wheat nucleus 69.65 78.19
TraesCS4A01G420100.1 Wheat nucleus 69.21 77.32
TraesCS7A01G068300.1 Wheat cytosol, nucleus, plastid 65.72 75.63
CDY72666 Canola nucleus 26.64 74.85
TraesCS4A01G419900.1 Wheat nucleus 63.54 74.81
TraesCS4A01G421000.1 Wheat nucleus 66.81 74.45
TraesCS7D01G062100.1 Wheat cytosol, nucleus, plastid 66.16 73.9
TraesCS4A01G421300.1 Wheat cytosol, nucleus, plastid 66.38 73.25
TraesCS7A01G068000.1 Wheat cytosol, nucleus, plastid 65.28 72.75
HORVU7Hr1G012780.1 Barley nucleus 65.5 66.96
CDY35029 Canola cytosol 28.38 62.5
Zm00001d036050_P001 Maize cytosol, nucleus, plastid 48.69 60.76
Os06t0131700-01 Rice nucleus 50.87 58.99
KRG97235 Soybean nucleus 32.31 55.85
EER87784 Sorghum cytosol, nucleus, plastid 51.97 55.61
KRG97237 Soybean nucleus 31.88 55.09
Solyc10g005010.2.1 Tomato nucleus 34.06 54.36
PGSC0003DMT400029321 Potato nucleus 35.81 52.4
CDY26917 Canola nucleus 34.06 50.65
Bra010183.1-P Field mustard nucleus 34.06 50.65
VIT_15s0048g02660.t01 Wine grape nucleus 41.05 48.7
CDY11382 Canola cytosol, nucleus, plastid 34.06 48.45
Bra007640.1-P Field mustard cytosol, nucleus, plastid 34.06 48.45
CDY25087 Canola cytosol, nucleus, peroxisome 34.28 48.16
HORVU7Hr1G075550.1 Barley cytosol, nucleus, plastid 41.7 47.99
AT3G61910.1 Thale cress nucleus 34.93 47.9
CDX73267 Canola cytosol 33.84 47.69
AT2G46770.1 Thale cress nucleus 37.99 47.67
CDY41554 Canola nucleus 37.12 47.62
CDX76597 Canola cytosol, nucleus, peroxisome 34.5 47.59
CDY27524 Canola nucleus 37.77 47.53
CDX80045 Canola nucleus 37.12 47.35
Bra003478.1-P Field mustard nucleus 34.72 47.32
CDX67870 Canola nucleus 34.72 47.32
Bra040486.1-P Field mustard nucleus 37.55 47.25
Bra004509.1-P Field mustard nucleus 36.9 47.08
PGSC0003DMT400014872 Potato nucleus 35.37 46.55
Solyc08g008660.2.1 Tomato nucleus 34.72 45.56
PGSC0003DMT400031571 Potato nucleus 36.68 45.41
VIT_02s0025g02710.t01 Wine grape nucleus 39.74 44.94
Bra023288.1-P Field mustard nucleus 35.59 44.78
CDX93819 Canola nucleus 35.59 44.78
CDY01243 Canola nucleus 36.24 44.74
AT1G32770.1 Thale cress nucleus 34.93 44.69
Zm00001d045463_P001 Maize nucleus 49.78 44.19
KRH47818 Soybean nucleus 38.43 44.0
KRH06383 Soybean nucleus 41.05 42.44
HORVU2Hr1G092030.2 Barley cytosol, nucleus, peroxisome 29.48 39.82
HORVU7Hr1G079500.1 Barley nucleus 31.66 39.19
HORVU6Hr1G060800.3 Barley nucleus 30.35 39.04
HORVU7Hr1G000140.6 Barley nucleus 29.26 38.4
HORVU4Hr1G083050.3 Barley cytosol, mitochondrion, nucleus 29.48 36.68
HORVU2Hr1G126080.3 Barley nucleus 24.67 35.31
HORVU2Hr1G126040.14 Barley nucleus 23.14 33.23
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150UniProt:A0A287VJ45GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G012760EnsemblPlants:HORVU7Hr1G012760.6InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sf
PFAM:PF02365PFscan:PS51005PANTHER:PTHR31989PANTHER:PTHR31989:SF39SUPFAM:SSF101941UniParc:UPI000B472808
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:-:18209302..18211725
Molecular Weight (calculated)
49663.8 Da
IEP (calculated)
6.554
GRAVY (calculated)
-0.439
Length
458 amino acids
Sequence
(BLAST)
001: DVLAPLPPIS LSLPSQVVSL YPITGNNFIP VDPTPSSPLH YCTTRSIMSI SVNGQSVVPP GFRFHPTEEE LLTYYLAKKV ASQRIDLDVI PDVDLNKLEP
101: WDIQECCRIG TGPQNDWYLF SHKDKKYPTG TRTNRATTVG FWKATGRDKA IYPAAGYGHI GMRKTLVFYQ GRAPHGHKSD WIMHEYRLED ATTPGNNPAN
201: RAIGNAPYYP GSSSSIRSVV GDQSSAQEDG WVICRVFKKK NIVVQQQADQ NGGGRRTASN NLVAAGAIEL SRSNCSSTVT TASDHAKATH MQQHYYSASD
301: DALDHILNQY MHGRSSTTTT SCKQETNATN PSSSALDHLI NSECHNGSST LYEKLPPLEH VVPGELLPPT EYSGDWDALD RLAAYELNGL SDAASAKTTN
401: GMPFIVDELG GATAYSGGGR LHVSSITGTG DGDLWSLGRS VSSLHADLTI NSFNAVGY
Best Arabidopsis Sequence Match ( AT1G32770.1 )
(BLAST)
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.