Factsheet for PGSC0003DMT400029321

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005010.2.1	Tomato	nucleus	80.19	87.46
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	16.61	82.54
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	32.59	68.92
TraesCS7A01G068200.1	Wheat	cytosol, nucleus, plastid	41.85	65.83
Os08t0115800-01	Rice	nucleus	48.24	59.68
KRH47818	Soybean	nucleus	62.94	49.25
PGSC0003DMT400014872	Potato	nucleus	53.67	48.28
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	38.98	47.84
PGSC0003DMT400031571	Potato	nucleus	56.55	47.84
KRH06383	Soybean	nucleus	65.81	46.5
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	58.47	45.98
TraesCS7D01G314000.2	Wheat	nucleus	59.11	45.12
TraesCS7A01G317100.1	Wheat	nucleus	59.11	45.12
Zm00001d049678_P001	Maize	nucleus	54.63	45.12
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	52.72	44.96
PGSC0003DMT400025026	Potato	nucleus	46.01	44.44
Os06t0131700-01	Rice	nucleus	55.27	43.8
TraesCS7D01G062600.1	Wheat	cytosol, nucleus, plastid	54.31	43.04
Zm00001d035084_P001	Maize	nucleus	57.19	42.82
TraesCS7D01G062400.1	Wheat	nucleus	55.27	42.82
KXG24274	Sorghum	nucleus	57.19	42.72
TraesCS4A01G420900.1	Wheat	cytosol, nucleus, plastid	54.63	42.64
TraesCS4A01G420000.1	Wheat	cytosol, nucleus, plastid	53.67	42.64
TraesCS7A01G068300.1	Wheat	cytosol, nucleus, plastid	53.99	42.46
TraesCS7D01G062100.1	Wheat	cytosol, nucleus, plastid	55.59	42.44
TraesCS7A01G068000.1	Wheat	cytosol, nucleus, plastid	55.59	42.34
TraesCS4A01G420200.1	Wheat	nucleus	54.95	42.16
TraesCS4A01G421200.1	Wheat	nucleus	54.31	41.98
TraesCS7D01G063300.1	Wheat	cytosol, nucleus, plastid	53.99	41.94
TraesCS4A01G421300.1	Wheat	cytosol, nucleus, plastid	55.59	41.93
TraesCS4A01G421100.1	Wheat	nucleus	53.35	41.85
TraesCS4A01G421000.1	Wheat	nucleus	54.95	41.85
TraesCS4A01G419900.1	Wheat	nucleus	51.76	41.65
TraesCS4A01G420100.1	Wheat	nucleus	54.31	41.46
TraesCS7D01G062300.1	Wheat	cytosol, nucleus, plastid	54.31	41.36
EER87784	Sorghum	cytosol, nucleus, plastid	54.95	40.19
PGSC0003DMT400009136	Potato	nucleus	44.41	40.06
PGSC0003DMT400002318	Potato	nucleus	39.3	38.92
HORVU7Hr1G012780.1	Barley	nucleus	55.27	38.62
PGSC0003DMT400012079	Potato	nucleus	36.74	38.59
PGSC0003DMT400067086	Potato	nucleus	39.3	37.39
HORVU7Hr1G012760.6	Barley	plastid	52.4	35.81
Zm00001d045463_P001	Maize	nucleus	53.99	32.75

Protein Annotations

EntrezGene:102584189	MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:M1ASL3	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
EnsemblPlantsGene:PGSC0003DMG400011268	PGSC:PGSC0003DMG400011268	EnsemblPlants:PGSC0003DMT400029321	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF45
SUPFAM:SSF101941	UniParc:UPI0002967763	RefSeq:XP_015166445.1	SEG:seg	:	:

Description

NAC domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400011268]

Coordinates

chr10:-:96185..97225

Molecular Weight (calculated)

36238.3 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.826

Length

313 amino acids

Sequence
(BLAST)

001: MPEEMSISVN GQSQVPPGFR FHPTEEELLQ YYLKKKVANE KIDLDVIQEV DLNKLEPWDI QDKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK
101: ATGRDKVIYS NSRRIGMRKT LVFYKGRAPH GQKSDWIMHE YRFDDHITTI ASTQEEGWVI CRIFKKKNHV KSFETTSQSI SNTRLYPNDE GPLEQLLHYM
201: RSSTCKEENH VMMNNYHDTN FHDKFMQLPN LDTPSGHPNS CEGELNNWIA VDRLVASHLN GQTINDYDHQ YNTNILGAAT SNHDYQQDQC DLWSFATVSS
301: TNDSLCHVSN GMI

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.