Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 38.99 | 77.39 |
| CDY72666 | Canola | nucleus | 31.65 | 76.69 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 65.57 | 70.57 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 73.92 | 68.22 |
| Os08t0115800-01 | Rice | nucleus | 42.53 | 66.4 |
| Os04t0536500-01 | Rice | cytosol | 27.09 | 66.05 |
| CDY35029 | Canola | cytosol | 34.18 | 64.9 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 62.78 | 61.23 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 39.49 | 61.18 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 63.29 | 60.83 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 62.03 | 60.05 |
| TraesCS7D01G062100.1 | Wheat | cytosol, nucleus, plastid | 62.28 | 60.0 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 60.51 | 59.9 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 59.75 | 59.9 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 60.76 | 59.85 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 59.75 | 59.75 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 60.0 | 59.55 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 62.53 | 59.52 |
| TraesCS7D01G062400.1 | Wheat | nucleus | 60.76 | 59.41 |
| TraesCS7D01G062300.1 | Wheat | cytosol, nucleus, plastid | 61.52 | 59.12 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 57.72 | 58.61 |
| TraesCS7D01G063300.1 | Wheat | cytosol, nucleus, plastid | 59.75 | 58.56 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 60.51 | 58.29 |
| Os06t0530400-01 | Rice | cytosol, nucleus, peroxisome | 29.62 | 57.92 |
| Solyc10g005010.2.1 | Tomato | nucleus | 41.77 | 57.49 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 59.49 | 57.18 |
| KRG97235 | Soybean | nucleus | 37.72 | 56.23 |
| KRG97237 | Soybean | nucleus | 37.72 | 56.23 |
| PGSC0003DMT400029321 | Potato | nucleus | 43.8 | 55.27 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 62.28 | 54.91 |
| Zm00001d045463_P001 | Maize | nucleus | 69.37 | 53.1 |
| CDY26917 | Canola | nucleus | 40.76 | 52.27 |
| Bra010183.1-P | Field mustard | nucleus | 40.76 | 52.27 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 41.77 | 51.24 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 41.77 | 51.24 |
| HORVU7Hr1G012760.6 | Barley | plastid | 58.99 | 50.87 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 49.62 | 50.78 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 41.52 | 50.31 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 42.28 | 50.3 |
| CDY41554 | Canola | nucleus | 45.32 | 50.14 |
| AT2G46770.1 | Thale cress | nucleus | 46.08 | 49.86 |
| CDX80045 | Canola | nucleus | 45.32 | 49.86 |
| AT3G61910.1 | Thale cress | nucleus | 42.03 | 49.7 |
| Bra004509.1-P | Field mustard | nucleus | 45.06 | 49.58 |
| Bra003478.1-P | Field mustard | nucleus | 42.03 | 49.4 |
| CDX67870 | Canola | nucleus | 42.03 | 49.4 |
| PGSC0003DMT400014872 | Potato | nucleus | 43.29 | 49.14 |
| CDX73267 | Canola | cytosol | 40.25 | 48.92 |
| PGSC0003DMT400031571 | Potato | nucleus | 45.82 | 48.92 |
| Bra040486.1-P | Field mustard | nucleus | 44.56 | 48.35 |
| CDY27524 | Canola | nucleus | 44.3 | 48.08 |
| Solyc08g008660.2.1 | Tomato | nucleus | 42.28 | 47.85 |
| AT1G32770.1 | Thale cress | nucleus | 43.29 | 47.77 |
| CDX93819 | Canola | nucleus | 43.04 | 46.7 |
| Bra023288.1-P | Field mustard | nucleus | 43.04 | 46.7 |
| CDY01243 | Canola | nucleus | 43.54 | 46.36 |
| KRH47818 | Soybean | nucleus | 46.58 | 46.0 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 47.09 | 45.93 |
| KRH06383 | Soybean | nucleus | 48.86 | 43.57 |
| Os02t0252200-01 | Rice | nucleus | 36.71 | 40.39 |
| Os02t0643600-00 | Rice | nucleus | 37.47 | 40.0 |
| Os10t0532000-01 | Rice | cytosol | 32.66 | 37.83 |
| Os06t0104200-01 | Rice | nucleus | 34.68 | 37.64 |
| Os08t0103900-01 | Rice | nucleus | 30.13 | 36.73 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 26.08 | 36.01 |
| Os04t0443801-02 | Rice | mitochondrion | 0.51 | 0.53 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:4340011 | ProteinID:AAO33144.1 | ProteinID:BAA84803.1 | ProteinID:BAB19365.1 |
| ProteinID:BAS95987.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | EnsemblPlantsGene:Os06g0131700 | EnsemblPlants:Os06t0131700-01 | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | UniProt:Q9SNM6 | SUPFAM:SSF101941 | UniParc:UPI000000367E | RefSeq:XP_015643041.1 |
| SEG:seg | : | : | : | : | : |
Description
NAC domain-containing protein 007, NAC domain-containing protein 7, SECONDARY WALL ASSOCIATED NAC DOMAIN PROTEIN 1, SECONDARY WALL NAC DOMAIN PROTEIN 1, secondary wall NAC transcription factor 1, secondary wall-associated NAC 1, no apical meristemSimilar to NAM protein. (Os06t0131700-01);No apical meristem (NAM) protein domain containing protein. (Os06t0131700-02)
Coordinates
chr6:-:1699521..1702611
Molecular Weight (calculated)
42029.0 Da
IEP (calculated)
7.069
GRAVY (calculated)
-0.338
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISVNGQSV VPPGFRFHPT EEELLTYYLK KKVASERIDL DVIRDVDLNK LEPWDIQERC RIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKAIYSSSNR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD DPSSASASVS VNLPSYYSSS SSSSSPMHGV AGDQGAQEEG WVICRVFKKK NLVHHGGGAA
201: AASHHAAAKL AAAAMEGSPS NCSTVTVSDH VKAQMLHSSA SDDALDHILQ YMGRSGCKQE TKPAAMSASS AAAAAALEQH LSTPQYGKFM KLPPLEHVAG
301: GVGLLAAAGG GGEYCSAADA SGIADWDTLD RLAASYELNG ALSDVASGKN MAGFFDVVDQ PAGAAAFSSG DGDLWSLARS VSSSLHADLT TMNNV
101: DKAIYSSSNR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD DPSSASASVS VNLPSYYSSS SSSSSPMHGV AGDQGAQEEG WVICRVFKKK NLVHHGGGAA
201: AASHHAAAKL AAAAMEGSPS NCSTVTVSDH VKAQMLHSSA SDDALDHILQ YMGRSGCKQE TKPAAMSASS AAAAAALEQH LSTPQYGKFM KLPPLEHVAG
301: GVGLLAAAGG GGEYCSAADA SGIADWDTLD RLAASYELNG ALSDVASGKN MAGFFDVVDQ PAGAAAFSSG DGDLWSLARS VSSSLHADLT TMNNV
001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG
Arabidopsis Description
NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.