Factsheet for TraesCS7D01G062600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G420200.1	Wheat	nucleus	87.09	84.31
TraesCS7D01G063300.1	Wheat	cytosol, nucleus, plastid	84.3	82.63
TraesCS4A01G420100.1	Wheat	nucleus	84.56	81.46
TraesCS7D01G062400.1	Wheat	nucleus	83.29	81.44
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	51.65	80.0
TraesCS4A01G421000.1	Wheat	nucleus	82.53	79.32
TraesCS7D01G062300.1	Wheat	cytosol, nucleus, plastid	79.49	76.4
CDY72666	Canola	nucleus	30.63	74.23
TraesCS7D01G062100.1	Wheat	cytosol, nucleus, plastid	74.43	71.71
HORVU7Hr1G012760.6	Barley	plastid	78.99	68.12
HORVU7Hr1G012780.1	Barley	nucleus	74.18	65.4
CDY35029	Canola	cytosol	32.66	62.02
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	57.47	61.85
Os06t0131700-01	Rice	nucleus	59.75	59.75
EER87784	Sorghum	cytosol, nucleus, plastid	60.51	55.84
Solyc10g005010.2.1	Tomato	nucleus	40.51	55.75
KRG97237	Soybean	nucleus	36.71	54.72
KRG97235	Soybean	nucleus	36.71	54.72
PGSC0003DMT400029321	Potato	nucleus	43.04	54.31
Bra010183.1-P	Field mustard	nucleus	40.76	52.27
CDY26917	Canola	nucleus	40.76	52.27
CDX73267	Canola	cytosol	40.51	49.23
VIT_15s0048g02660.t01	Wine grape	nucleus	48.1	49.22
Bra007640.1-P	Field mustard	cytosol, nucleus, plastid	39.75	48.76
CDY11382	Canola	cytosol, nucleus, plastid	39.75	48.76
AT2G46770.1	Thale cress	nucleus	44.81	48.49
CDY41554	Canola	nucleus	43.54	48.18
CDX80045	Canola	nucleus	43.54	47.91
CDY25087	Canola	cytosol, nucleus, peroxisome	39.49	47.85
PGSC0003DMT400014872	Potato	nucleus	42.03	47.7
Bra004509.1-P	Field mustard	nucleus	43.29	47.63
AT3G61910.1	Thale cress	nucleus	40.25	47.6
CDX76597	Canola	cytosol, nucleus, peroxisome	40.0	47.59
Solyc08g008660.2.1	Tomato	nucleus	41.52	46.99
TraesCS7D01G314000.2	Wheat	nucleus	48.61	46.83
Bra003478.1-P	Field mustard	nucleus	39.75	46.73
CDX67870	Canola	nucleus	39.75	46.73
CDY27524	Canola	nucleus	43.04	46.7
Bra040486.1-P	Field mustard	nucleus	42.78	46.43
PGSC0003DMT400031571	Potato	nucleus	43.29	46.22
Bra023288.1-P	Field mustard	nucleus	42.53	46.15
CDX93819	Canola	nucleus	42.53	46.15
CDY01243	Canola	nucleus	43.04	45.82
AT1G32770.1	Thale cress	nucleus	41.52	45.81
VIT_02s0025g02710.t01	Wine grape	nucleus	45.82	44.69
KRH47818	Soybean	nucleus	45.06	44.5
Zm00001d045463_P001	Maize	nucleus	57.97	44.38
KRH06383	Soybean	nucleus	47.34	42.21
TraesCS7D01G329200.1	Wheat	nucleus	38.23	41.03
TraesCS2D01G382800.1	Wheat	cytosol, nucleus, peroxisome	34.68	40.41
TraesCS7D01G008500.1	Wheat	nucleus	34.18	40.18
TraesCS2D01G309800.1	Wheat	nucleus	34.18	40.18
TraesCS6D01G220600.1	Wheat	nucleus	35.19	39.49
TraesCS2D01G576400.1	Wheat	nucleus	28.86	37.38
TraesCS2D01G576300.1	Wheat	cytosol, mitochondrion, nucleus	29.11	36.51
TraesCS2D01G576200.1	Wheat	nucleus	29.11	36.28
TraesCS4D01G316800.1	Wheat	nucleus	33.67	36.24
TraesCS7D01G322700.1	Wheat	nucleus	28.61	36.22
TraesCS2D01G576500.2	Wheat	nucleus	28.61	35.76

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF39	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS7D01G062600	EnsemblPlants:TraesCS7D01G062600.1	SEG:seg

Description

No Description!

Coordinates

chr7D:-:34149256..34151703

Molecular Weight (calculated)

42131.2 Da

IEP (calculated)

7.259

GRAVY (calculated)

-0.397

Length

395 amino acids

Sequence
(BLAST)

001: MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQARC RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKPIYSAAGR IGMRKTLVFY KGRAPHGHKS DWIMHEYRLD DAVAPATNTV FAAGDASSYY SGISSPVRGV AGDQSPLAQE DGWVICRVFK KNIVAQHQAG
201: QSGGRGGGAA SNKLVGAGAV ERSQSNCSST VTAASDPAKA QMMHCAGSDD GLDNILRYMD RSSAASCKQE TKPTNPSSSP LDQLINSACH SGSSTLYEKF
301: MKLPPLEYGG DWDALDRLAA YELNGLSDAA TAKTTNGMSY IVDELGGATT AYTSGGTAHS SSLTGGGDGD LWSLARSVSS LHADLTMTCF NAVGC

Best Arabidopsis Sequence Match ( AT1G32770.1 )
(BLAST)

001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV

Arabidopsis Description

NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.