Factsheet for PGSC0003DMT400031571

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G012740.1	Barley	cytosol, nucleus, plastid	13.51	79.37
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	29.19	72.97
TraesCS7A01G068200.1	Wheat	cytosol, nucleus, plastid	35.68	66.33
GSMUA_AchrUn_...	Banana	nucleus	41.62	60.39
Os08t0115800-01	Rice	nucleus	40.0	58.5
PGSC0003DMT400029321	Potato	nucleus	47.84	56.55
PGSC0003DMT400014872	Potato	nucleus	52.97	56.32
GSMUA_Achr3P12230_001	Banana	nucleus	48.65	53.1
VIT_15s0048g02660.t01	Wine grape	nucleus	54.86	52.59
GSMUA_Achr9P24450_001	Banana	nucleus	49.19	51.85
HORVU7Hr1G012730.2	Barley	cytosol, nucleus	32.97	47.84
PGSC0003DMT400025026	Potato	nucleus	40.27	45.99
Os06t0131700-01	Rice	nucleus	48.92	45.82
Zm00001d036050_P001	Maize	cytosol, nucleus, plastid	45.41	45.78
HORVU7Hr1G075550.1	Barley	cytosol, nucleus, plastid	48.65	45.23
TraesCS7D01G314000.2	Wheat	nucleus	48.92	44.15
Zm00001d049678_P001	Maize	nucleus	45.14	44.06
TraesCS7A01G317100.1	Wheat	nucleus	48.65	43.9
TraesCS7A01G068300.1	Wheat	cytosol, nucleus, plastid	46.76	43.47
TraesCS7D01G062600.1	Wheat	cytosol, nucleus, plastid	46.22	43.29
TraesCS7D01G062100.1	Wheat	cytosol, nucleus, plastid	47.84	43.17
TraesCS4A01G420900.1	Wheat	cytosol, nucleus, plastid	46.76	43.14
TraesCS7A01G068000.1	Wheat	cytosol, nucleus, plastid	47.84	43.07
KXG24274	Sorghum	nucleus	48.65	42.96
TraesCS4A01G420000.1	Wheat	cytosol, nucleus, plastid	45.41	42.64
TraesCS4A01G421200.1	Wheat	nucleus	46.49	42.47
TraesCS4A01G420200.1	Wheat	nucleus	46.76	42.4
TraesCS7D01G062300.1	Wheat	cytosol, nucleus, plastid	47.03	42.34
TraesCS7D01G062400.1	Wheat	nucleus	46.22	42.33
TraesCS4A01G421300.1	Wheat	cytosol, nucleus, plastid	47.3	42.17
TraesCS4A01G419900.1	Wheat	nucleus	44.32	42.16
TraesCS4A01G421100.1	Wheat	nucleus	45.41	42.11
TraesCS4A01G421000.1	Wheat	nucleus	46.76	42.09
Zm00001d035084_P001	Maize	nucleus	47.3	41.87
TraesCS7D01G063300.1	Wheat	cytosol, nucleus, plastid	45.41	41.69
TraesCS4A01G420100.1	Wheat	nucleus	45.95	41.46
EER87784	Sorghum	cytosol, nucleus, plastid	47.3	40.89
PGSC0003DMT400009136	Potato	nucleus	38.11	40.63
PGSC0003DMT400012079	Potato	nucleus	31.89	39.6
HORVU7Hr1G012780.1	Barley	nucleus	47.03	38.84
PGSC0003DMT400002318	Potato	nucleus	32.97	38.61
PGSC0003DMT400067086	Potato	nucleus	33.24	37.39
HORVU7Hr1G012760.6	Barley	plastid	45.41	36.68
Zm00001d045463_P001	Maize	nucleus	47.57	34.11

Protein Annotations

EntrezGene:102578181	MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:M1AVV2	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
EnsemblPlantsGene:PGSC0003DMG400012113	PGSC:PGSC0003DMG400012113	EnsemblPlants:PGSC0003DMT400031571	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF45
SUPFAM:SSF101941	UniParc:UPI000296A190	RefSeq:XP_006344004.1	SEG:seg	:	:

Description

NAC domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012113]

Coordinates

chr8:-:56740108..56741604

Molecular Weight (calculated)

42646.7 Da

IEP (calculated)

6.823

GRAVY (calculated)

-0.855

Length

370 amino acids

Sequence
(BLAST)

001: MSKDMNLSVN GESQVPPGFR FHPTEEELVH YYLRKKVAYE KIDLDVIRDV DLNKLEPWDI QEKCRIGSTP QNDWYLFSHK DKKYPTGTRT NRATAAGFWK
101: ATGRDKVIHS NCKRIGMRKT LVFYKGRAPH GQKSDWIMHE YRLDDNIIIP QQTTLNVNES SNNLQEEGWV VCRVFKKKNY HKALESPSPL MSTIQKPNYN
201: DGVLDQILMY MHKQQNSSLE NNNNQLLHLD DMQINNTNSF MINNSNTPTF IHLPPLHNHH SPTNNNNIIQ QHCETPKTSL PVDWSQTSTA SGPSDWVSLD
301: RLVASQLNGH DNISSNNNMI CFPLHHHGHA RQNDDDDAFS QSQPHDDHQV DVEFWSYSPS PSDPLCHLSV

Best Arabidopsis Sequence Match ( AT2G46770.1 )
(BLAST)

001: MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW
101: KATGRDKIIY SNGRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK KNLHKTLNSP VGGASLSGGG
201: DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV
301: NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV SNGSG

Arabidopsis Description

NAC043NAC domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q84WP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.