Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 85.35 | 82.79 |
| TraesCS7D01G062400.1 | Wheat | nucleus | 85.6 | 82.43 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 82.01 | 80.96 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 41.13 | 80.4 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 84.06 | 79.76 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 80.98 | 79.15 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 81.49 | 77.7 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 80.72 | 76.4 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 49.1 | 74.9 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 77.12 | 74.07 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 73.52 | 71.68 |
| CDY72666 | Canola | nucleus | 29.82 | 71.17 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 74.04 | 70.07 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 73.52 | 68.92 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 73.26 | 63.62 |
| HORVU7Hr1G012760.6 | Barley | plastid | 74.81 | 63.54 |
| CDY35029 | Canola | cytosol | 31.88 | 59.62 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 55.78 | 59.13 |
| Os06t0131700-01 | Rice | nucleus | 58.61 | 57.72 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 59.38 | 53.97 |
| Solyc10g005010.2.1 | Tomato | nucleus | 39.07 | 52.96 |
| KRG97237 | Soybean | nucleus | 35.48 | 52.08 |
| KRG97235 | Soybean | nucleus | 35.48 | 52.08 |
| PGSC0003DMT400029321 | Potato | nucleus | 41.65 | 51.76 |
| CDY26917 | Canola | nucleus | 38.82 | 49.03 |
| Bra010183.1-P | Field mustard | nucleus | 38.82 | 49.03 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 38.56 | 46.58 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 38.56 | 46.58 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 38.82 | 46.32 |
| CDX73267 | Canola | cytosol | 38.56 | 46.15 |
| CDY41554 | Canola | nucleus | 42.16 | 45.94 |
| AT3G61910.1 | Thale cress | nucleus | 39.33 | 45.81 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 39.07 | 45.78 |
| AT2G46770.1 | Thale cress | nucleus | 42.93 | 45.75 |
| PGSC0003DMT400014872 | Potato | nucleus | 40.87 | 45.69 |
| CDX80045 | Canola | nucleus | 42.16 | 45.68 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 45.24 | 45.6 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 23.65 | 45.54 |
| CDX67870 | Canola | nucleus | 39.33 | 45.54 |
| Bra003478.1-P | Field mustard | nucleus | 39.33 | 45.54 |
| Bra004509.1-P | Field mustard | nucleus | 41.9 | 45.4 |
| Bra023288.1-P | Field mustard | nucleus | 41.9 | 44.78 |
| CDX93819 | Canola | nucleus | 41.9 | 44.78 |
| Solyc08g008660.2.1 | Tomato | nucleus | 40.1 | 44.7 |
| CDY27524 | Canola | nucleus | 41.65 | 44.51 |
| Bra040486.1-P | Field mustard | nucleus | 41.65 | 44.51 |
| CDY01243 | Canola | nucleus | 42.42 | 44.47 |
| PGSC0003DMT400031571 | Potato | nucleus | 42.16 | 44.32 |
| AT1G32770.1 | Thale cress | nucleus | 40.62 | 44.13 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 45.24 | 42.93 |
| Zm00001d045463_P001 | Maize | nucleus | 56.81 | 42.83 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 44.47 | 42.72 |
| KRH47818 | Soybean | nucleus | 42.67 | 41.5 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 29.05 | 40.36 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 33.93 | 39.29 |
| KRH06383 | Soybean | nucleus | 44.73 | 39.28 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 36.5 | 38.59 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 28.79 | 37.58 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 32.13 | 37.2 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 32.13 | 37.2 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 32.39 | 37.17 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 33.42 | 36.93 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 28.79 | 36.72 |
| TraesCS5A01G491700.1 | Wheat | cytosol, mitochondrion, nucleus | 34.19 | 36.24 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 29.56 | 36.05 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 28.79 | 35.9 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 29.31 | 35.19 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4A01G419900 | EnsemblPlants:TraesCS4A01G419900.1 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:690674348..690689421
Molecular Weight (calculated)
42426.7 Da
IEP (calculated)
7.894
GRAVY (calculated)
-0.556
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISVNGQSV VPPGFRFHPT EEELLTYYLA RKVASQRIDR DVIPNVDLNK LEPWDIQELC RVGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKAIYSVAGS GRIGMRKTLV FYKARAPHGH KSDWIMHEYR LHHAVPVNPT AGDATYYSSS DSFPIRGMAG DQSSTQEDGW VICRVFKKKN IAVQHQDGQN
201: HDGGGASSNK LVGAGAMEGS QTKCSSTLTA ATDHAKTQMK HCSASDDGLD HILSYKGRSS TASCRQETKP TNQSSSALDH LINNACHNGT STLYDKFMKL
301: PPLEHVVPGG LLPPPPTEYN RDWDALDRLT AYELDGLSNP ALAEAANGGG TLHTPSVTGP GDGDLWSLVR PVSSLHADLT MTWFKAVGC
101: DKAIYSVAGS GRIGMRKTLV FYKARAPHGH KSDWIMHEYR LHHAVPVNPT AGDATYYSSS DSFPIRGMAG DQSSTQEDGW VICRVFKKKN IAVQHQDGQN
201: HDGGGASSNK LVGAGAMEGS QTKCSSTLTA ATDHAKTQMK HCSASDDGLD HILSYKGRSS TASCRQETKP TNQSSSALDH LINNACHNGT STLYDKFMKL
301: PPLEHVVPGG LLPPPPTEYN RDWDALDRLT AYELDGLSNP ALAEAANGGG TLHTPSVTGP GDGDLWSLVR PVSSLHADLT MTWFKAVGC
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.