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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • peroxisome 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G386300.1
TraesCS2B01G403300.1
TraesCS2D01G382800.1
TraesCS4A01G486200.1
TraesCS6A01G237900.1
TraesCS6B01G286200.1
TraesCS6D01G220600.1
TraesCS7A01G008800.1
TraesCS7D01G008500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G62380.1 TraesCS2A01G386300.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS2B01G403300.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS2D01G382800.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS4A01G486200.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS6A01G237900.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS6B01G286200.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS6D01G220600.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS7A01G008800.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS7D01G008500.1 AT5G62380.1 18445131
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G403300.1 Wheat cytosol, nucleus, peroxisome 97.05 97.05
HORVU2Hr1G092030.2 Barley cytosol, nucleus, peroxisome 95.58 95.58
TraesCS2D01G382800.1 Wheat cytosol, nucleus, peroxisome 95.28 95.28
Os04t0536500-01 Rice cytosol 38.94 81.48
PGSC0003DMT400055552 Potato cytosol, nucleus, peroxisome 35.1 80.41
OQU82026 Sorghum nucleus 68.14 67.94
Zm00001d002828_P001 Maize cytosol 68.73 67.73
TraesCS6A01G237900.1 Wheat nucleus 65.19 62.78
GSMUA_Achr11P... Banana nucleus 60.77 58.52
KRH23801 Soybean nucleus 57.23 55.91
VIT_16s0022g00690.t01 Wine grape cytosol, nucleus, peroxisome 58.41 55.15
KRH62610 Soybean nucleus 55.46 55.13
KRH39986 Soybean nucleus 56.64 54.24
TraesCS7A01G008800.1 Wheat nucleus 53.69 54.17
TraesCS4A01G486200.1 Wheat nucleus 53.39 53.87
TraesCS7A01G068200.1 Wheat cytosol, nucleus, plastid 31.56 53.77
KRH56355 Soybean nucleus 55.46 51.79
Solyc06g034340.1.1 Tomato nucleus 51.33 51.18
CDY00280 Canola nucleus 38.05 49.62
Solyc03g083880.2.1 Tomato nucleus 45.43 49.36
TraesCS2A01G565900.1 Wheat cytosol, nucleus, plastid 28.32 47.52
TraesCS2A01G566400.1 Wheat nucleus 35.99 43.57
AT5G62380.1 Thale cress nucleus 43.36 42.24
CDY16776 Canola nucleus 41.3 42.17
CDY58006 Canola nucleus 43.07 41.95
Bra035896.1-P Field mustard nucleus 41.0 41.87
CDX87246 Canola nucleus 41.3 41.67
CDY30716 Canola nucleus 44.25 41.55
Bra010077.1-P Field mustard nucleus 42.48 41.5
TraesCS5A01G491700.1 Wheat cytosol, mitochondrion, nucleus 44.84 41.42
TraesCS2A01G566000.1 Wheat nucleus 36.28 41.28
TraesCS2A01G566200.1 Wheat nucleus 36.87 40.98
Bra029266.1-P Field mustard nucleus 43.95 40.93
TraesCS2A01G566100.1 Wheat nucleus 36.87 39.19
TraesCS7A01G326000.1 Wheat nucleus 35.99 39.1
TraesCS2A01G311500.1 Wheat nucleus 38.05 38.39
TraesCS7A01G349500.1 Wheat nucleus 40.12 36.96
TraesCS2A01G566300.1 Wheat nucleus 34.81 36.42
TraesCS7A01G068300.1 Wheat cytosol, nucleus, plastid 41.89 35.68
TraesCS4A01G421200.1 Wheat nucleus 42.18 35.31
TraesCS7A01G068000.1 Wheat cytosol, nucleus, plastid 42.18 34.79
TraesCS4A01G421100.1 Wheat nucleus 40.71 34.59
TraesCS4A01G421300.1 Wheat cytosol, nucleus, plastid 42.18 34.46
TraesCS4A01G420200.1 Wheat nucleus 41.0 34.07
TraesCS4A01G420900.1 Wheat cytosol, nucleus, plastid 40.12 33.92
TraesCS7A01G317100.1 Wheat nucleus 41.0 33.9
TraesCS4A01G420000.1 Wheat cytosol, nucleus, plastid 39.23 33.76
Bra029264.1-P Field mustard nucleus 30.09 33.55
TraesCS4A01G420100.1 Wheat nucleus 40.41 33.41
TraesCS4A01G419900.1 Wheat nucleus 37.17 32.39
TraesCS4A01G421000.1 Wheat nucleus 39.23 32.36
CDY00281 Canola cytosol 3.54 17.91
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005
PANTHER:PTHR31989PANTHER:PTHR31989:SF3SUPFAM:SSF101941EnsemblPlantsGene:TraesCS2A01G386300EnsemblPlants:TraesCS2A01G386300.1SEG:seg
Description
No Description!
Coordinates
chr2A:-:632291933..632293261
Molecular Weight (calculated)
38689.4 Da
IEP (calculated)
6.934
GRAVY (calculated)
-0.667
Length
339 amino acids
Sequence
(BLAST)
001: MNAFSHVPPG FRFHPTDEEL VDYYLRKKVQ LKRIDLDIIK DVDLYKIEPW DLQERCKIGT EDQNDWFFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI
101: YVKHCLVGMR KTLVFYKGRA PNGQKLDWIM HEYRLETNEN GAPHDEGWVV CKVFKKRVAT VQRMAATDSA FWFNNDHVAF MAPRVDSPRQ AVHHLQNAAY
201: HHGHHQTYHH PCKVELEYHQ LLPQEPASFL QLPQLEMPGL PDLIGAVAAS LQPCNQTHDG QASRQLEIEP VYVTDASAGE WRDLDKFMAS QLSHDGSTPK
301: ESSSYANPAL AFQAEGKHEE ALDYVSASAS SGGDNGLWK
Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.