Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G060800.3 | Barley | nucleus | 87.4 | 93.54 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 85.83 | 92.9 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 85.56 | 92.61 |
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 30.97 | 79.73 |
| Zm00001d051294_P001 | Maize | cytosol | 36.22 | 78.86 |
| Zm00001d017396_P001 | Maize | nucleus | 43.31 | 77.46 |
| KXG31125 | Sorghum | nucleus | 69.55 | 76.37 |
| Os02t0643600-00 | Rice | nucleus | 73.49 | 75.68 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 58.01 | 65.19 |
| GSMUA_Achr11P... | Banana | nucleus | 56.69 | 61.36 |
| KRH23801 | Soybean | nucleus | 53.02 | 58.21 |
| KRH39986 | Soybean | nucleus | 53.02 | 57.06 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 53.02 | 56.27 |
| KRH62610 | Soybean | nucleus | 50.13 | 56.01 |
| KRH56355 | Soybean | nucleus | 50.92 | 53.44 |
| CDY00280 | Canola | nucleus | 35.7 | 52.31 |
| Solyc03g083880.2.1 | Tomato | nucleus | 42.52 | 51.92 |
| Solyc06g034340.1.1 | Tomato | nucleus | 46.19 | 51.76 |
| AT5G62380.1 | Thale cress | nucleus | 42.26 | 46.26 |
| CDY16776 | Canola | nucleus | 40.16 | 46.08 |
| Bra035896.1-P | Field mustard | nucleus | 39.9 | 45.78 |
| Bra010077.1-P | Field mustard | nucleus | 41.21 | 45.24 |
| CDY58006 | Canola | nucleus | 41.21 | 45.11 |
| CDX87246 | Canola | nucleus | 39.63 | 44.94 |
| CDY30716 | Canola | nucleus | 42.52 | 44.88 |
| Bra029266.1-P | Field mustard | nucleus | 42.26 | 44.23 |
| TraesCS4B01G320300.1 | Wheat | cytosol, mitochondrion, nucleus | 41.73 | 43.32 |
| TraesCS2B01G627000.1 | Wheat | nucleus | 33.33 | 42.33 |
| TraesCS2B01G627200.1 | Wheat | nucleus | 34.12 | 41.01 |
| TraesCS2B01G627100.1 | Wheat | nucleus | 33.07 | 40.13 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 32.02 | 39.1 |
| TraesCS2B01G328300.1 | Wheat | nucleus | 34.12 | 38.69 |
| TraesCS7B01G233300.1 | Wheat | nucleus | 37.01 | 37.9 |
| Bra029264.1-P | Field mustard | nucleus | 29.4 | 36.84 |
| CDY00281 | Canola | cytosol | 4.2 | 23.88 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS6B01G286200 | EnsemblPlants:TraesCS6B01G286200.1 | SEG:seg |
Description
No Description!
Coordinates
chr6B:+:515577631..515578893
Molecular Weight (calculated)
43259.8 Da
IEP (calculated)
7.119
GRAVY (calculated)
-0.670
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQDKCKIGM EEQNDWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKPI
101: YTNNCLVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNEN GATPVCNYSS LHPYLYAFHL LTMDIAGLIL QEEGWVVCRV FKKRVATVRR MADMNSPCWF
201: DDHGAGGGFM PDLDSPRQLG YQHQNLAAYH SQPQQQQHLY HCKPELEYHH LLPQEAFMQQ LPLLESPKPT AYIGHGSSSS VPSSISNHPL AHDGASRFAA
301: HQPPMDHALY TGDSSATDWR LLDKFVASQL FSHDGTNPKE QATHPNPAMQ VFQVENKHDQ ALDYASTSAG GSGGGSAHLW K
101: YTNNCLVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNEN GATPVCNYSS LHPYLYAFHL LTMDIAGLIL QEEGWVVCRV FKKRVATVRR MADMNSPCWF
201: DDHGAGGGFM PDLDSPRQLG YQHQNLAAYH SQPQQQQHLY HCKPELEYHH LLPQEAFMQQ LPLLESPKPT AYIGHGSSSS VPSSISNHPL AHDGASRFAA
301: HQPPMDHALY TGDSSATDWR LLDKFVASQL FSHDGTNPKE QATHPNPAMQ VFQVENKHDQ ALDYASTSAG GSGGGSAHLW K
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.