Factsheet for TraesCS2B01G627100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G627000.1	Wheat	nucleus	79.3	83.0
TraesCS2B01G627200.1	Wheat	nucleus	82.8	82.02
TraesCS2A01G566400.1	Wheat	nucleus	70.7	79.29
HORVU2Hr1G126080.3	Barley	nucleus	80.57	79.06
HORVU2Hr1G126040.14	Barley	nucleus	80.25	79.0
TraesCS2D01G576500.2	Wheat	nucleus	73.89	73.42
TraesCS7B01G226600.1	Wheat	nucleus	53.5	53.85
GSMUA_Achr3P22360_001	Banana	nucleus	50.96	52.98
Os08t0103900-01	Rice	nucleus	53.82	52.16
GSMUA_Achr7P23170_001	Banana	nucleus	41.08	51.81
VIT_18s0072g01060.t01	Wine grape	nucleus	45.86	46.01
Os04t0691300-00	Rice	cytosol, nucleus	40.13	44.06
Solyc11g018660.1.1	Tomato	nucleus	43.63	44.05
PGSC0003DMT400002318	Potato	nucleus	44.27	43.99
Solyc06g065410.2.1	Tomato	nucleus	44.59	43.48
PGSC0003DMT400067086	Potato	nucleus	44.9	42.86
CDX96362	Canola	nucleus	44.27	42.77
CDX72846	Canola	nucleus	44.27	42.77
Bra016098.1-P	Field mustard	nucleus	43.95	42.72
AT1G71930.2	Thale cress	nucleus	43.95	42.59
CDY03671	Canola	nucleus	43.95	42.2
CDX82202	Canola	nucleus	43.95	42.2
Bra007996.1-P	Field mustard	nucleus	43.95	42.2
KRG91808	Soybean	nucleus	45.54	41.94
KRH34977	Soybean	nucleus	46.18	41.91
TraesCS4B01G320300.1	Wheat	cytosol, mitochondrion, nucleus	43.63	37.33
TraesCS2B01G403300.1	Wheat	cytosol, nucleus, peroxisome	39.17	36.28
TraesCS6B01G286200.1	Wheat	cytosol	40.13	33.07
TraesCS2B01G328300.1	Wheat	nucleus	34.71	32.44
TraesCS7B01G233300.1	Wheat	nucleus	37.9	31.99

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF103	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS2B01G627100	EnsemblPlants:TraesCS2B01G627100.1	SEG:seg

Description

No Description!

Coordinates

chr2B:+:799029231..799030371

Molecular Weight (calculated)

34944.9 Da

IEP (calculated)

6.043

GRAVY (calculated)

-0.531

Length

314 amino acids

Sequence
(BLAST)

001: MLAMEHQQEE SCVPPGFRFH PTEEELVGYY LARKVAAQKI DLDIIQEVDL YRIEPWDLQE RCGGGGRGGR GACQVAEEDQ SLSEWYFFSF KDRKYPSGTR
101: TNRATAAGFW KATGRDKPVI SSRSRGVIGM RKTLVFYRGR APNGRKTDWI IHEYRLQTSE HAPTQDEGWV VCRAFQKPAP NQRPSYIFPA YAAAPDLGGY
201: YDARPWLQLH GQGGGDLHYL QSAAGAAAAG GLDVKYSSED LLDSKQSLFD NIPQLIQSPQ TTALLGCGDD AILQQQGQGQ TVLGIDWNFL DSLLSTSQLH
301: EYSATAASHL HLEQ

Best Arabidopsis Sequence Match ( AT1G71930.1 )
(BLAST)

001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS

Arabidopsis Description

NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.