Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002318 | Potato | nucleus | 61.66 | 61.08 |
| Solyc11g018660.1.1 | Tomato | nucleus | 60.06 | 60.45 |
| Solyc06g065410.2.1 | Tomato | nucleus | 60.38 | 58.7 |
| KRG91808 | Soybean | nucleus | 63.9 | 58.65 |
| PGSC0003DMT400067086 | Potato | nucleus | 61.34 | 58.36 |
| KRH34977 | Soybean | nucleus | 64.22 | 58.09 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 36.1 | 55.94 |
| AT1G71930.2 | Thale cress | nucleus | 56.23 | 54.32 |
| Bra016098.1-P | Field mustard | nucleus | 55.59 | 53.87 |
| CDX96362 | Canola | nucleus | 55.59 | 53.54 |
| CDX72846 | Canola | nucleus | 55.27 | 53.23 |
| Bra007996.1-P | Field mustard | nucleus | 55.59 | 53.21 |
| CDY03671 | Canola | nucleus | 55.59 | 53.21 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 42.17 | 53.01 |
| CDX82202 | Canola | nucleus | 55.27 | 52.91 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 45.05 | 50.36 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 40.89 | 49.81 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 47.28 | 49.01 |
| VIT_04s0023g03110.t01 | Wine grape | nucleus | 52.4 | 48.96 |
| TraesCS2D01G576400.1 | Wheat | nucleus | 47.28 | 48.52 |
| Zm00001d034984_P001 | Maize | nucleus | 42.81 | 48.38 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 46.01 | 48.32 |
| TraesCS2B01G627200.1 | Wheat | nucleus | 48.88 | 48.27 |
| TraesCS2D01G576300.1 | Wheat | cytosol, mitochondrion, nucleus | 48.24 | 47.94 |
| HORVU2Hr1G126080.3 | Barley | nucleus | 48.88 | 47.81 |
| TraesCS2B01G627000.1 | Wheat | nucleus | 45.69 | 47.67 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 46.33 | 47.54 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 47.28 | 46.4 |
| TraesCS2D01G576200.1 | Wheat | nucleus | 46.65 | 46.06 |
| TraesCS2D01G576500.2 | Wheat | nucleus | 46.33 | 45.89 |
| TraesCS2B01G627100.1 | Wheat | nucleus | 46.01 | 45.86 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 46.96 | 45.37 |
| Zm00001d050039_P001 | Maize | nucleus | 42.49 | 45.08 |
| HORVU2Hr1G126040.14 | Barley | nucleus | 45.37 | 44.51 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 44.09 | 44.23 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 43.77 | 43.91 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 43.77 | 43.91 |
| Os08t0103900-01 | Rice | nucleus | 45.37 | 43.83 |
| EES13158 | Sorghum | nucleus | 46.01 | 43.24 |
| Zm00001d002934_P001 | Maize | nucleus | 44.73 | 42.68 |
| EES14359 | Sorghum | nucleus | 43.77 | 40.9 |
| VIT_19s0085g01210.t01 | Wine grape | nucleus | 40.58 | 40.71 |
| VIT_02s0154g00020.t01 | Wine grape | nucleus | 46.01 | 40.34 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 45.05 | 39.28 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 35.46 | 38.81 |
| VIT_18s0089g01120.t01 | Wine grape | nucleus | 38.66 | 33.7 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 40.89 | 33.16 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 39.94 | 30.86 |
Protein Annotations
Description
No Description!
Coordinates
chr18:-:20598144..20599943
Molecular Weight (calculated)
36312.6 Da
IEP (calculated)
6.321
GRAVY (calculated)
-0.738
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMESCVPPG FRFHPTEQEL VDYYLKRKIN SLKIDLDVII EIDLYRMEPW DIQDRCKLGY DEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAV
101: ILRNRIIGMR KTLVFYKGRA PNGRKTDWIM HEYRLQTSEH GPPQEEGWVV CRAFKKPTSS HKQSYEAWSH AYYVRDSSHV EPPSLPATLS PMHMVHPNQG
201: FYQRYFGSEQ ELMYNHGIMN NQAFEIPQLD SPSALSPSLA TKEVFEHNGM NNSEYFEDEN SDHAKQYIDW KNLDDLLASQ LADTTSSAPL VPYNSELGAQ
301: NPVSHLLGCF PDL
101: ILRNRIIGMR KTLVFYKGRA PNGRKTDWIM HEYRLQTSEH GPPQEEGWVV CRAFKKPTSS HKQSYEAWSH AYYVRDSSHV EPPSLPATLS PMHMVHPNQG
201: FYQRYFGSEQ ELMYNHGIMN NQAFEIPQLD SPSALSPSLA TKEVFEHNGM NNSEYFEDEN SDHAKQYIDW KNLDDLLASQ LADTTSSAPL VPYNSELGAQ
301: NPVSHLLGCF PDL
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.